Marinomonas arctica: IBG28_06250
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Entry
IBG28_06250 CDS
T06902
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mard
Marinomonas arctica
Pathway
mard03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IBG28_06250 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mard03400
]
IBG28_06250 (recB)
Enzymes [BR:
mard01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IBG28_06250 (recB)
DNA repair and recombination proteins [BR:
mard03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IBG28_06250 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QNT07227
UniProt:
A0A7H1J9R1
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All DBs
Position
1346772..1350503
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AA seq
1243 aa
AA seq
DB search
MSLSNESVSVNQLAVNAEALNMIPEPLNALTFPLFGKRLIEASAGTGKTYTIANLYLRLL
VPSGPSLSGNSGDLDKPLTVDQILVVTFTEAATAELKARIRGRIRAARKALLQGESRDVF
LADWLAQMSDDQRAGAIEKLLYAEKQMDEAAVFTIHGFCQRMLSQNAFESRMLFQQTIET
DELAPLSMAVKDVWRSVFYPMDDTKAALIQPIWSNPDALLKDLYLLNNQPDAKIAVPDYD
WESALSQAQQTMAAVRAMWLSQSHDIVEALERSGIKRTFWRKDPSKDIDAMTQWANSTRF
ELDKSLEKFDTHEHASRLSKGGDLPAHAFFGLVQNLRESFPDAGRLKAVLLTQLWQQTQE
RMKRWKRSTQSLTFTDLLTSLDVALTKDEAGKLAERIRHLYPIALIDEFQDTDAVQYRIF
STIYAPATVDQNTLGLIMIGDPKQAIYAFRGADIYTYLAAKKRVDSVYSLATNYRSSAAM
IQAVNGLFTTQTEPFRVTGIPFIEVQDRGVASGFTRQGQTQAALQFLYQASDEPVSAKDY
RQTMAQSCAAHLHQLLLEGQQGSALIEGQGVRPKDIALLVTNFSQANALKDALRQRGIAS
VYLSDKGSVFETVEARELLIVLTAILSNGQESKLRSALATSLVDWSLEDLDTLNHDDVVY
EKWGQAFRDYLEIWDKQGLLPMLREFMQDVSLAANMLSHTGGERRLTDFLHLTEKLQQKS
LELDSKEGVLRYLRLAIQAPNGNSDEQKIRLETDAELVRIVTIHKSKGLEYPIVYLPFAF
TPYRDQDKSALYHDAQQQLWIAIDPDEAQTEQHKEELYAAEIRLAYVALTRSKEACFIGA
MEVGKGANKTRGAVSEVHLSGVGALIGEGESLEAGDLYPSIEGLCGRYQHGQMQLLDLPN
EPPSLPRFKMAQADLVEPRARDFTGRVERDWWVGSYSSLVVEDKEHHDESVPGLDEMARF
VDPLLDETDVSDPVLEPQKSRFTFPKGAKPGTFLHDTLEGKALHDVSANPSFNDLLKTSH
HKRMIDFYERQGFGEWQDVLSEWLPDMINTELMTGMSLGRLAPSVCRKEMEFFIPVTGMN
ALQLDRISREHDEVSRIAPMIQDRPLKGMLKGFIDLLFEYQGRYYVLDYKSNYLGDNLAD
YEPERLVHAIAEHRYDLQYQLYTLALHRLLKQRLPNYDYEKHMGGVVYLFLRGMRVGQQT
GVFQNRLTLEHVTALDKLFSGKAQSDKSMGSKSNDEVVQYGLF
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttctaacgagtccgtttctgttaatcagcttgccgttaatgcagaagccttg
aatatgattcctgagccgctcaacgcattaaccttcccgttgtttggcaaacggctaatc
gaagccagtgccggcacagggaaaacctacaccattgccaacttgtatctgcgtttgctg
gtgccgagtgggccgtctttatctgggaatagcggtgatttagataaaccgctcacagtg
gatcagatcttggtggtgacctttaccgaggccgccaccgccgagctaaaagcacggatt
cgtgggcgcatccgagccgcgcgaaaagctttattgcaaggcgaaagcagagatgtcttt
ctggctgactggctggcgcaaatgtcagacgatcagcgcgcgggcgccattgaaaaactg
ctgtatgctgagaagcaaatggacgaagcggcggtgtttaccattcatggcttttgtcag
cgtatgctgagtcaaaacgcctttgaaagtcgcatgttgttccagcaaaccattgagacc
gacgaattggcgcccttgtctatggcggtgaaggacgtttggcgcagcgtgttttatcca
atggacgacaccaaggcggctttgattcagcctatttggtcgaatcctgacgccttgctg
aaagatttgtacttattgaataaccagcctgacgccaaaatcgcggtgcccgattacgat
tgggaaagtgccctaagtcaggcgcaacaaaccatggccgcggtgcgtgccatgtggctg
agtcaatcgcatgatattgttgaggcccttgagcgcagtggtataaaacgcacgttttgg
cgcaaagatccatcgaaagacatcgacgccatgacgcagtgggcgaattcaacccgtttt
gaactggacaaaagcctcgaaaaatttgatacccatgaacacgccagtcgactgagtaaa
ggcggtgacttgccggctcacgcattctttggcttggtgcaaaacttgcgtgaaagcttc
cctgacgcggggcgcttaaaagcggtcttactgactcagctgtggcagcaaacccaagaa
cgcatgaaacgctggaagcgcagcacacaatcactcacttttaccgatttgctcacgtct
ctcgatgtggcgctaacgaaagacgaagcgggcaagttggcagagcgcattcgccacctt
tatccgattgctttaatcgacgaatttcaagacacagatgcggtgcaatatcggattttc
tctaccatttatgccccagcgacggtagatcaaaatacgcttggcttgatcatgatcggt
gatccaaaacaggcgatatatgcctttcgtggcgcggatatttacacctatttggcggct
aaaaaacgtgtcgacagtgtgtattccttggcgaccaattaccggtcttctgcggccatg
attcaggcggtcaatggactttttactacccaaacggaaccctttcgcgtcaccgggatt
ccttttattgaggtgcaagatcgtggtgttgccagtggctttactcgacaagggcaaacg
caagcggcgctgcagtttttgtatcaagccagtgatgagcccgtgtcagcaaaagactat
cggcaaacgatggcgcaatcttgtgccgcgcatcttcatcaactgttactggaaggacag
cagggttctgcgctgatcgaaggacagggcgtgcgaccaaaagatattgccttgttggtg
accaattttagtcaagccaatgcgttaaaagacgccttacgtcagcgcggtatcgccagt
gtgtatctcagtgacaagggctcggtgtttgaaaccgttgaggcgcgcgagctactgatt
gtgctgacagcgatattatccaatgggcaagaaagtaaattgcgttcggccttggcaacc
agcttggttgattggtcgttggaagatttggatacgctcaatcacgacgacgtggtgtat
gaaaaatggggacaagctttccgtgattatctagaaatctgggacaagcaaggcttattg
cctatgttaagagagtttatgcaagacgtgtcactggcggcgaatatgctcagccatact
ggtggcgaacgtcgcttaaccgactttctgcatttgaccgaaaagctacagcaaaagtcc
ttagagttggattccaaagaaggcgttttacgttatctcaggttggcgattcaagcgccg
aatggcaacagcgatgagcaaaagattcgccttgaaaccgatgcggagttggtgcggatt
gtcaccattcacaaaagtaagggcttggaatatccgatagtgtatttgccgtttgcgttt
acgccgtatcgagatcaagacaagtcggctttataccacgatgcgcaacagcaattgtgg
atcgccattgaccctgatgaagcgcagaccgagcagcacaaagaagagttgtatgcggcc
gaaattcgtttggcttatgtggcattaacgcgctccaaagaagcgtgctttatcggtgcc
atggaggtaggaaaaggggcgaataaaactcgtggtgcggtatctgaggtgcatcttagt
ggtgtgggtgccttgattggcgaaggcgagtcgcttgaggctggtgatttgtacccaagt
atcgaaggcctttgtgggcgttatcagcatggtcaaatgcagttgttggatttacctaat
gagcctccgagcttaccacgattcaaaatggcgcaagccgacttagttgaaccccgtgcg
cgagattttactgggcgtgtcgagcgagactggtgggtgggaagttattcttcgctcgta
gtggaagacaaagagcatcacgatgaaagcgtaccaggcttggatgagatggcgcgtttt
gtcgatcctttattggatgaaacggacgtgtctgaccccgtgcttgagccgcaaaagagt
cgctttacttttcccaaaggcgccaagcctggcactttcttgcatgatacgctggaaggc
aaagccctgcatgatgtgtctgctaatccgagctttaacgacttattaaaaaccagtcac
cataagcgcatgatcgatttttacgagcgtcagggctttggcgaatggcaagacgtattg
agcgaatggttgcccgatatgattaataccgagttaatgacgggaatgagtttggggcgt
ttggcgccctcggtttgtcgcaaagaaatggagttttttattccggtgaccggcatgaat
gccttgcagttggaccgcatttctcgtgaacacgatgaggtatcgcgtattgcgccgatg
atccaagatcgtccattaaaaggcatgttaaaaggctttatcgatttattgttcgaatac
caaggccgttattatgtgctggattataagtccaattacttgggggataacctggctgat
tacgagccagagagattagttcatgctattgccgagcacagatacgatttgcagtaccag
ctttataccttagccttacatcgtttgttgaagcagcgtttgccgaattatgactatgaa
aaacacatgggcggcgtggtgtatttgtttttgcgtggcatgcgagtagggcagcaaacg
ggtgtttttcaaaaccgtttaacgcttgagcatgtgactgcgctcgataagctgtttagt
ggcaaggctcagagtgataaatccatgggtagcaaatcgaatgatgaggtagtgcaatat
ggacttttctaa
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