Marinomonas arctica: IBG28_08930
Help
Entry
IBG28_08930 CDS
T06902
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mard
Marinomonas arctica
Pathway
mard03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IBG28_08930 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mard03400
]
IBG28_08930 (xthA)
Enzymes [BR:
mard01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
IBG28_08930 (xthA)
DNA repair and recombination proteins [BR:
mard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IBG28_08930 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
QNT07703
UniProt:
A0A7H1JB37
LinkDB
All DBs
Position
complement(1953902..1954717)
Genome browser
AA seq
271 aa
AA seq
DB search
MKFVSFNINGLRARPHQITALVEKHAPDVIGLQEIKVHDDAFPHEIPQSVGYHAYYYGQK
SHYGVAIFSKQEATNVEYGFPDDEEDAQRRMIIATFDTPQGAVKVINGYFPQGESRDHET
KFPAKRKFYADLMQYLASHSPDEKIIVMGDINISPTDLDIGIGEVNAKRWLKTGKCSFLP
EEREWFSTLANWGLTDTYRQLNPTRNDRFSWFDYRSKGFEDTPKRGLRIDVIMASNGLTP
YLEDADVDYDLRALEKPSDHAPIWTSFNLNK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatttgtctcttttaacatcaacggcttacgtgctcgaccacatcaaataaccgcg
cttgtcgaaaaacacgcaccggacgtcattggcctgcaagaaatcaaggtgcacgatgat
gcttttcctcacgagattccgcagtctgttggctatcatgcttattattacggacaaaaa
tcccattacggcgtggctatttttagtaagcaagaagcgactaacgtggagtatggcttt
ccagatgatgaagaagacgcgcagcgtcgaatgattattgcaacgtttgacactccccaa
ggagcagtaaaagtgataaacggttacttccctcaaggagaaagccgcgaccacgaaact
aagtttcctgcgaagcgcaaattttatgcagacttaatgcagtaccttgcttctcattct
cctgatgaaaaaatcattgtcatgggtgacattaatatctcccctacagatttagacatc
ggcattggagaggtcaacgccaaacgctggttaaaaacaggtaaatgcagtttcttgcca
gaagaaagagaatggttctctaccttggccaactggggactaacagacacttatcgtcaa
cttaacccaacacgaaatgatcgtttcagctggtttgactatcgctctaaaggctttgaa
gacacgcctaaacgaggcttacgaatcgacgtcattatggcttccaatggactgacacct
tatttagaagatgccgatgtagattacgatttgcgtgccctagagaagccatccgatcac
gcccctatttggacaagctttaatcttaacaaataa
DBGET
integrated database retrieval system
