Marinomonas arctica: IBG28_08975
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Entry
IBG28_08975 CDS
T06902
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mard
Marinomonas arctica
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mard03400
]
IBG28_08975 (sbcD)
DNA repair and recombination proteins [BR:
mard03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IBG28_08975 (sbcD)
Archaeal homologous recombinant proteins
IBG28_08975 (sbcD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QNT07711
UniProt:
A0A7H1JB45
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All DBs
Position
1962891..1964168
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AA seq
425 aa
AA seq
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MKILHTSDWHLGQHFMGKSRRDEHKAFIDWLLALVDRESIDAVIIAGDVFDTGSPPSYAR
EMYHQLVLDMKARHCQLVIVAGNHDSVSMLNESKSLLMYLDTQVSSQATLEDIDSHVVAL
KDKTGEVAAWVCAVPYLRPKDVMQSVAGQSEQDKKLSLLQSIGEFYQQVYEAACEKNKAL
KTPVPIIGTGHLTAVGGQVSESVRDLYVGTIEALPTSVFPAFDYLALGHIHRAQPINKSG
RFRYSGSPIPLSFDELGRDKTLVIVNTDLLGEDTFVEDLFAEPVDPVQLVTIPNFQPMAS
VKGNLKDVIKQISALPLDEDKTLWLEVTVIADEYLSDVHKRLLEVIEGKPIELLRVMRRS
AIEKKNDGFEARKTLSELTVGDVFQQSLKSNLELDEEESKTLTELFNACLTELEAHQQNG
EEKQS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctacacacctctgactggcatcttggtcagcactttatggggaaatcccgc
cgagatgagcataaggcctttattgattggttgttggcgctggtggatcgagagtcaatc
gatgcggtgattatcgcgggcgatgtgttcgatactggttctccgccaagttatgcccgt
gaaatgtaccatcagttggtgttggatatgaaggctcgtcactgtcagttggtgattgtt
gcaggtaatcacgattcggtcagtatgttaaatgaatctaagagtttgctgatgtatctt
gatacgcaagtgtctagtcaagccactctcgaagatattgactctcatgttgttgcgctg
aaagacaagaccggcgaggtggctgcttgggtttgtgctgtgccgtatttgcgcccaaaa
gacgtgatgcaaagcgttgctgggcaatctgagcaagacaagaagttgagtttgttgcag
tcgattggcgaattttaccagcaggtgtatgaagcagcgtgtgagaaaaataaagcgctg
aaaacgccagtgccgattattggtactgggcatttgaccgcagtgggcgggcaagtgagt
gagtcggttcgtgatctttatgtgggcacaatagaagccttgccgacgtctgtgtttccg
gcgtttgattaccttgcgcttgggcacattcatcgtgctcagccaatcaataaaagcggt
cgattccgttacagcgggtcgcccattccgttgagttttgatgaactgggacgagacaag
acgctggtgatagtgaataccgacttgttaggtgaagacacctttgttgaagacttgttt
gccgagccggttgaccctgttcagttggtaacgattcctaattttcagcccatggcgagt
gtaaaaggcaatctgaaagacgttattaagcagatttctgccttgccattagacgaagat
aaaacgttgtggttggaagtcactgtgattgcggatgagtatttgagcgatgtgcataag
cgtttgctagaggtgattgagggaaagccaatcgagttgctgcgagtcatgcgaagaagt
gccatagagaaaaagaacgacggttttgaggcgcgtaaaaccttgtcagaattgacggtc
ggtgatgtgtttcagcagagtcttaaatcgaatttagagttggatgaagaagagtctaaa
accctgacggagctttttaatgcctgtttgacggagttggaagcgcatcagcaaaacggc
gaggagaagcaatcatga
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