KEGG   Marinomonas arctica: IBG28_09230
Entry
IBG28_09230       CDS       T06902                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
mard  Marinomonas arctica
Brite
KEGG Orthology (KO) [BR:mard00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mard02044]
    IBG28_09230 (tssC)
Secretion system [BR:mard02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IBG28_09230 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 T6SS_VipA TssC
Other DBs
NCBI-ProteinID: QNT07754
UniProt: A0A7H1JB88
LinkDB
Position
2024214..2026151
AA seq 645 aa
MESNQKKLSRVRSPRVHITYDVEIGDAIVRRELPLIVGVLADLSGMPAVSLPPVKERVFV
EIDRDNFNDVMTGNAVRLVYKVDNVFDTSAGPLNLELLFNSIDAFEPINLVKQIDVTNKR
YESRNRIRDMMAKLDGNDPLDGILAEVLADDTLQKELKDLFGAAEKWSTVVPTDLVNRML
KQGRMALDESQIPYALELIGEFSVSILEGVAELNGRFASDLMGDKIAQIDNQLTNQINLV
MHAPEFQALEATWRGLHFLVKNTETGTSLKIRLLNISKRDLLKDLQKAVEFDQSALFKKI
YEEEFGTYGGDPFSFLVGDYEFGRHPEDIELLEKISGVASSAHAPFISSAYAKLFDMEDF
FTLSQPRDLSKIFESAELIKWRSFRSSEDARYVSLTLPKVLLRLPYGPDTVVAEGFDFIE
DVDGSDAHKYLWGNPAFVLAQRITNAYSKFGWLAAIRGVEGGGLVEGLPAHTFKTPAGDI
KLTCPTQVSITDRREKELNDLGFMAILHCKGSDKAAFFGGQTTGQPQKYNTEAANANARI
STMLPYVLNASRFAHYIKVIMRDKVGSFTTKEGVSDYLNNWISNYVLVDDSAPQEMKASY
PLRESRIEVTDVPGKPGSYRSIVFLRPHFQLEELTTSIRLVAELP
NT seq 1938 nt   +upstreamnt  +downstreamnt
ttggaaagtaatcagaaaaaattatccagggtgagatcaccaagagtacacatcacatat
gatgtcgaaataggtgatgcaattgttcgaagggagttgcctttgattgttggcgtgtta
gctgatttatctggcatgccagcggtttcgttacctccggttaaagagcgagtatttgtc
gaaatagaccgcgacaactttaatgatgtgatgaccggtaatgctgttcgcttggtttat
aaagttgataacgtctttgacacaagtgctgggccgcttaaccttgagttgctgttcaat
agtatagatgcctttgaacctatcaatttggtgaagcaaattgatgttactaataagcgc
tatgaatcaagaaatcgcatacgagatatgatggctaagctggatggcaatgatccttta
gacggcattcttgcggaagtattggctgatgatacgctgcaaaaagaacttaaggacctc
tttggcgcagctgaaaaatggtctacggtggtgccaacagacttagttaatcgaatgttg
aagcaaggccgtatggcgttagatgaaagccaaattccttatgctttagagcttattggt
gaattttcggtctcgatattggagggggttgctgaattgaacggccgattcgccagtgat
ttgatgggagataaaatcgctcaaattgacaatcaattgaccaatcagattaatttggtg
atgcatgctcctgagtttcaagcattggaggcaacttggcgtggtctgcatttcctagtt
aagaatactgagactggcacctctttaaagattcgcttgttgaatatttctaagcgtgat
ttgcttaaagatctgcagaaagcggtggaatttgatcaaagtgctttgttcaaaaaaatc
tatgaagaagaatttggtacatatggtggtgatcctttctctttcctcgtgggcgattac
gaatttggtcgtcatccagaagatatagagttattggaaaaaatttctggtgttgcctca
tccgctcatgctccttttatttcttctgcttatgcaaaactctttgatatggaagatttt
tttacgctttctcaaccaagagacttaagtaagatttttgagagtgctgagttaataaaa
tggcgtagcttccgtagtagtgaagacgcacgttatgtgtccttaaccctgcctaaagta
ttattacggttaccctatggccccgataccgtggttgcggaaggctttgattttattgag
gacgtggatggttcggatgcacataaatacttgtggggtaacccagcttttgtactcgct
cagcgaattaccaatgcctactcaaaattcggttggttagcggctattcgaggtgtagag
ggcggtggattagtcgaggggttgccagcacatacgttcaaaacaccagcaggtgatatc
aagctaacttgtcctactcaagtgtcgattactgatcgccgtgaaaaagagctgaacgat
ttaggctttatggcgattttgcactgtaaaggcagtgataaagccgcattttttggaggg
cagacaactgggcaacctcaaaaatacaataccgaggcagcgaatgcgaatgcgcgaatt
tctactatgttgccttatgtgttgaatgcctctcgttttgcccattacattaaggtcatt
atgcgtgacaaagtgggtagttttaccaccaaagaaggcgtctctgattatcttaataac
tggattagtaattatgtgttggttgacgatagtgctccgcaagaaatgaaagcgagttat
ccgctcagagaatcacggattgaagtgacggatgtacctggtaagcctggaagctaccgt
tctattgtatttttgcgtccgcattttcaactagaagagttaacgacgtctattcgtttg
gtggcggagttaccttaa

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