Marinomonas arctica: IBG28_14165
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Entry
IBG28_14165 CDS
T06902
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mard
Marinomonas arctica
Pathway
mard03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IBG28_14165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mard03019
]
IBG28_14165
03400 DNA repair and recombination proteins [BR:
mard03400
]
IBG28_14165
Enzymes [BR:
mard01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IBG28_14165
Messenger RNA biogenesis [BR:
mard03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IBG28_14165
DNA repair and recombination proteins [BR:
mard03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IBG28_14165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
AAA_22
TniB
DDE_3
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QNT04842
UniProt:
A0A7H1J2X6
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All DBs
Position
3066761..3068722
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AA seq
653 aa
AA seq
DB search
MIPLAQGLHNIFGFNEFREGQQQTIEQLLAGHSSLAVFPTGSGKSLCYQFTATQLPHLTL
VISPLIALMHDQLAFLNAKGIPAACLDSSQSKDQSQAVMSGVQNGTIKILMISVERFKNE
RFRRFIKHIPISMLVVDEAHCISEWGHNFRPDYLKLPSYQQELAIPLVLLLTATATRRVQ
RDMAQKFAIHPQHIVQTGFYRHNLDIDLIPIQSHQKLNALKNILNETQGASIVYVTQQKT
AEDVAHALQADGYSAVAYHAGLDSEIRSAIQSDFMVSKTRIIVATIAFGMGIDKSDIRLV
VHFDLPKSIENYSQEIGRAGRDNQPSRCVLLANLEGLNTLENFVYGDTPEPHDIDNLLSC
ITAQTAEQTHESEWETQLYGLSQQTNIRSLPLKTLLVQLELLGAITPKYSYYADVRLKWE
GDPIAFAQHIPTQWQAAYQAILKGIQYKKIWGTPNFDKLFQEAGLSRGDVLQVLEFAADY
HVLTLESKGLTEVYQVHTEHFHHQTLANQLQQYVEEKQTAEIERLATMIRFFQLDRCLNH
NLARYFGDQDSPEHCGHCSVCRGKVLIFAQPSGLNNDIEKWGDLAGYIQEFTAHVGSKSP
ATPVTAVLITRFLTGLTQPIFTKIKARQLSGFGVYEEQNYLTVLNVVQQCLSR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgataccattagcgcaaggactgcataatatatttggttttaacgaattccgagaagga
caacaacaaacaatagaacaattactcgcagggcattcatcgcttgcggtgtttccgaca
ggctccggaaaatccctgtgttatcaatttacggcgacccaacttccccatttaacattg
gtcatctcgccattaatcgccttaatgcatgaccaattggcatttttaaacgccaaaggc
attccagccgcttgcctcgattccagccaaagcaaagatcaaagccaagctgttatgtct
ggcgtgcagaatggcaccattaagattttgatgatttcggttgagcgctttaaaaacgaa
cgttttcgacgctttatcaaacacatccccatttctatgctagtggtggatgaagcccat
tgtatttcagaatggggccataactttcgacctgactacttaaagctaccctcttatcaa
caagaactcgccataccattggtcttactgctaaccgccaccgcgacgcgtcgtgtgcaa
cgagatatggcacaaaagtttgcaattcaccctcagcacatagtgcaaacgggcttttat
cgacacaacttagatattgatcttatccccatacaaagccatcaaaaactaaacgcctta
aaaaatattctcaatgaaacacaaggcgcgagtatcgtttatgttactcagcagaaaacg
gccgaagatgtcgctcacgctctacaagccgatggctactcggctgtcgcctaccatgca
ggtttggacagtgagattcgcagtgcaatccaatccgatttcatggtcagcaaaacgcgt
attatcgtggccaccatcgcgtttggtatggggatcgataagtcagatattcgcttagtg
gtacactttgatctgcccaaatcaatcgaaaactacagccaggaaattggccgcgcaggg
cgagacaatcagccaagccgttgtgtattgcttgctaatctagaaggattaaatacttta
gaaaattttgtctatggtgacacgccagagccccacgacattgacaatttactgagctgc
attaccgcgcaaacagccgaacagactcatgaaagtgaatgggaaacacagctttatgga
ttatctcagcagacaaatattcgctctttgcctttaaaaaccttgctggtacaactcgaa
ctattgggtgccatcacgccaaaatacagctattacgctgatgttcgcctaaaatgggaa
ggtgaccctattgcttttgcacaacacatcccaacccaatggcaagccgcctaccaggcc
atattaaaaggcattcaatacaagaaaatttggggcacacccaatttcgacaaacttttt
caggaagcgggattatcccgaggcgatgtcttgcaagtcttagaattcgccgccgattac
catgttcttaccctcgaaagtaaaggcttaaccgaagtgtatcaagttcataccgagcac
tttcatcatcaaaccttggccaatcaattacagcaatacgttgaagaaaaacaaacagcc
gaaattgaacgtcttgccactatgattcgcttctttcaattggatcgctgcttaaaccac
aatctagcccgttattttggggatcaggattcaccagagcattgcgggcattgctcggtt
tgtcggggaaaagtacttatatttgctcagccatccggcctaaacaatgatatagaaaaa
tggggagatttggctggctatatacaggagttcactgcgcatgttggaagcaaaagccca
gccacaccggtgacagccgtcttaataacgcgttttttaacaggcctaacacaacctatc
ttcaccaaaataaaagcccgtcagcttagcgggtttggtgtgtatgaggaacaaaactat
ttgaccgtattaaatgtcgtacaacagtgcctttctcgttaa
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