Marinomonas arctica: IBG28_16395
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Entry
IBG28_16395 CDS
T06902
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mard
Marinomonas arctica
Pathway
mard00521
Streptomycin biosynthesis
mard00523
Polyketide sugar unit biosynthesis
mard00541
Biosynthesis of various nucleotide sugars
mard01100
Metabolic pathways
mard01110
Biosynthesis of secondary metabolites
mard01250
Biosynthesis of nucleotide sugars
Module
mard_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IBG28_16395 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IBG28_16395 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IBG28_16395 (rfbC)
Enzymes [BR:
mard01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
IBG28_16395 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
YlxR
Motif
Other DBs
NCBI-ProteinID:
QNT08180
UniProt:
A0A7H1JCG4
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All DBs
Position
complement(3548896..3549432)
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AA seq
178 aa
AA seq
DB search
MDVIKTAIDGVVIIEPKVFGDERGFFLETFQAERYKELAGIDLPFVQDNHSRSGKNVLRG
LHFQKTKPQGKLVRVVRGEVFDVVVDIRKSSPTYGLWAGVLLSEENKRQFWVPPGLAHGF
VVLSEVADFEYKCTDYYDPSDEGCLIWNDPTVDIEWPEGIEPILSAKDQLGHALGELL
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggatgttattaaaaccgctatcgatggggtggtcattatagagcctaaagtgtttggt
gatgagcgaggcttttttttggaaacgtttcaggcggaacgctataaagaattggctggt
attgatttgccctttgttcaagataatcactctcgctcaggaaaaaatgtcttgcgtggt
ttgcattttcaaaagaccaaacctcagggtaagttagtacgagtggtgcgcggtgaagtg
tttgatgtggtagtagatatacgaaaaagttctcctacttatggtttgtgggctggggtt
ttattatcagaagaaaacaaacgtcagttttgggtgccacccggtttggctcatggtttt
gtggtgttgtcggaggtggcggatttcgaatacaagtgcacggattattatgatccgagt
gacgaaggttgtttgatatggaatgatccaaccgtcgacatagaatggccagaaggtatt
gagccgattttatcggcaaaagaccaactgggtcatgcattgggtgagttgttgtaa
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