Marinomonas arctica: IBG28_16405
Help
Entry
IBG28_16405 CDS
T06902
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mard
Marinomonas arctica
Pathway
mard00521
Streptomycin biosynthesis
mard00523
Polyketide sugar unit biosynthesis
mard00525
Acarbose and validamycin biosynthesis
mard00541
Biosynthesis of various nucleotide sugars
mard01100
Metabolic pathways
mard01110
Biosynthesis of secondary metabolites
mard01250
Biosynthesis of nucleotide sugars
Module
mard_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IBG28_16405 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IBG28_16405 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
IBG28_16405 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IBG28_16405 (rfbB)
00525 Acarbose and validamycin biosynthesis
IBG28_16405 (rfbB)
Enzymes [BR:
mard01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
IBG28_16405 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
QNT05249
UniProt:
A0A7H1J433
LinkDB
All DBs
Position
complement(3550365..3551447)
Genome browser
AA seq
360 aa
AA seq
DB search
MKILVTGGAGFIGSAVVRYLLSSTQHSVVNVDKLTYAGNLESIPASLQDARYAFEQVDIC
EASELDRVFHAHQPDVVMHLAAESHVDRSIDGPGDFIQTNVVGTYTLLEASRKYWLGLPG
DKKSAFRFHHISTDEVYGDLPHPDDVEGELTLFTETTPYAPSSPYSASKASSDHLVRAWL
RTYGLPTIVTNCSNNYGPYHFPEKLIPHVILNALSGKALPVYGDGSQIRDWLYVEDHARA
LVTVATEGKVGETYNIGGHNEKRNIEVVKTICALLEELVPTKPQGVNAYEDLITYVKDRP
GHDVRYAIDASKIAKELGWKPEETFETGMRKTVQWYLDNQDWWQRVLSGDYQLHRIGANA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttagtgaccggtggcgctggttttataggtagtgccgttgtacgttattta
ttgagcagcactcagcattcagttgttaacgtagataaactgacctacgcggggaattta
gagtctattcctgcatcattgcaggatgcgcgttatgcttttgaacaggtggatatttgt
gaggcgtctgagttagatcgagtgtttcatgcgcatcagccagatgtggtgatgcatctg
gcggcggagagccatgttgaccgttctatcgatggccctggggattttattcagactaat
gtggtgggtacttatactttattggaggcgagccgtaagtattggctgggactgcctggc
gataaaaagtccgcgtttcggtttcaccatatttcgaccgatgaggtgtatggggatttg
ccgcaccctgatgacgtggagggggagttgactttgtttacagaaaccacgccttatgca
ccgagttcgccttattctgccagtaaagccagctcagaccacttggttcgcgcttggttg
cgcacctatggtttgccgactattgtgactaattgctctaataattatgggccttatcat
tttcctgaaaagcttattcctcatgtgattttgaatgccttgtctggtaaagccttgcct
gtttatggtgacggttcgcaaattcgtgattggctatatgtggaagatcacgcacgggct
ttggtgacagtggcgacagagggcaaagtcggcgagacctataacatcggtggtcataat
gagaagcgtaatatcgaggtggtgaaaaccatttgtgctctgctggaagagctggtgcca
accaaaccgcagggcgtaaatgcctatgaagatttgatcacttatgtgaaagatcgtcca
ggtcacgatgtgcgttatgccattgatgcgagtaagattgctaaggagcttggatggaag
ccggaagaaacgtttgagactggcatgcgcaaaacagtacaatggtatttagacaatcag
gattggtggcagcgcgtactaagtggtgattaccaattacatcgtataggcgcaaacgcc
taa
DBGET
integrated database retrieval system