Marinomonas arctica: IBG28_19890
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Entry
IBG28_19890 CDS
T06902
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mard
Marinomonas arctica
Pathway
mard03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IBG28_19890 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mard03021
]
IBG28_19890 (rpoA)
03400 DNA repair and recombination proteins [BR:
mard03400
]
IBG28_19890 (rpoA)
Enzymes [BR:
mard01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IBG28_19890 (rpoA)
Transcription machinery [BR:
mard03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IBG28_19890 (rpoA)
DNA repair and recombination proteins [BR:
mard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IBG28_19890 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QNT05869
UniProt:
A0A7H1J5V3
LinkDB
All DBs
Position
complement(4299373..4300377)
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVSELLTPRNIEVQELGNCRAKVTLQPLERGFGHTLGNALRRILLSSMPGCAIVEVE
IDGVLHEYSAIEGVKEDVIEILLNLKGVAIALHGQDEATLTLSKKGPGIVTAGDIQLVAD
AEIANPDHVIAHLDDTAELTMQIKVARGRGYEPADARVAGDDETRPIGRLQLDASFSPVR
RVAYSVDNARVEQRTDLDKLVLDIESNGTIDPEEAIRRAATILQQQIAVFVALESESEAP
VVEEEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLAQRGLSLGMRLENWPPASLKDDSKVLAR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgagcgaattgttaaccccacgcaacattgaagttcaggaactaggc
aactgtcgcgctaaagttacactacaaccgctagagcgtggttttggtcatactttgggt
aacgctttgcgccgtatcctgctttcttcaatgccaggttgtgcgattgttgaagttgaa
atcgacggtgtattacacgaatacagcgcaatcgaaggggttaaagaagatgtaattgaa
attcttcttaacctgaaaggagttgcgatcgctctacacgggcaagatgaagcaactctt
actctaagtaaaaagggtcccggtatcgtaacagctggagatatccagttagttgctgat
gcagagatcgctaacccggatcatgttattgcgcacttagatgatactgctgagttaacc
atgcagatcaaagtcgctcgtggccgtggttatgagcctgctgatgctcgtgttgctggc
gacgatgagactcgtccaatcggtcgcttgcaactggatgcctcattcagccctgttcgc
cgtgttgcgtacagtgtcgataatgctcgtgttgagcagcgtacagatttagataagtta
gtcttagacatcgaatctaatggtacaatcgatcctgaagaagcaatccgtcgtgcagcg
actattttgcaacagcaaattgctgtgttcgtcgcccttgaaagcgagagcgaagcgcct
gttgtagaagaagaggatgagattgatccaattttgctacgcccggttgatgatcttgaa
ttgaccgttcgcagtgctaactgtttaaaagcagagaacatttattacatcggtgatttg
attcaacgcactgaggttgagcttcttaagacgcctaacctaggtaagaagtcgttaact
gaaatcaaagatgttttagcacagcgtggtttgtctttgggaatgcgtttagagaattgg
ccaccggctagtttgaaagacgatagcaaagttctagctcgctag
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