Marinomonas arctica: IBG28_20840
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Entry
IBG28_20840 CDS
T06902
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mard
Marinomonas arctica
Pathway
mard03420
Nucleotide excision repair
mard03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IBG28_20840 (uvrD)
03430 Mismatch repair
IBG28_20840 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mard03400
]
IBG28_20840 (uvrD)
Enzymes [BR:
mard01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IBG28_20840 (uvrD)
DNA repair and recombination proteins [BR:
mard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IBG28_20840 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
IBG28_20840 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QNT06046
UniProt:
A0A7H1J6D0
LinkDB
All DBs
Position
complement(4497413..4499626)
Genome browser
AA seq
737 aa
AA seq
DB search
MDVSFILDSLNDKQREAVAAPLQNSLVLAGAGSGKTRVLVHRIAWLMHAYELSPYSLMAV
TFTNKAAREMQGRIEQLVGVPPQGMWVGTFHGLAHRLLRAHWRDAGLKENFQIMDSDDQL
RLIKRIMRELNIDDTRWPPKQVSWFINAQKDEGRRAAHVPDSHDPFSKGMRELYYHYEEA
CERGGLLDFGELLLRAHELMLSTPALLRHYQERFRHVLVDEFQDTNTVQYAWLRIMVGDQ
GTITAVGDDDQSIYGWRGAKIENIHHFSKHFKDVQTIRLEQNYRSTGHILNAANGLIKHN
DDRLGKELWTDSGEGEPISLYAGFNEQDEARFIIGIIKQWRDKGTVLSDMAILYRSNAQS
RVIEECLVREQIAYRIYGGHRFYDRLEIKNALAYARLALDPNDDGAMERVINVPPRGIGE
RSIGTLREIARDNGCSMWQAAQEVVRQSLMPGRATNAIKTFLHLIEGLSTTVQQPDLNLN
DIFEQIIEEAGLIPFHEKEKGEKGEARIENLKELVGAAGGFSWNDEDEEFSSPLMAFLDK
AVLDAGDAQADEYQDAVQLMTLHSAKGLEFPLVFLTGVEENLFPSKMSFEEPGRLEEERR
LCYVGITRAMEKLYITYAESRRLFGSESFNSPSRFIKEIPPQCLEEVRLRSQVSRPVSLQ
RPDYQSEKNKLQNSSLLNNYKAPEVTVNMGDRVNHPVFGEGLVINYEGQGPQARVQVNFD
DEGTKWLVLSFAKLEVL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttttatcctcgactcactgaatgacaagcaacgggaagcggttgccgcg
cccttgcagaatagccttgttttggctggtgctgggtcgggtaagacccgtgttttggtc
catcgcatcgcttggctgatgcacgcttacgagctatcaccctatagtttgatggccgtt
acattcaccaataaggccgctcgcgagatgcaaggccgtattgaacaattggttggtgtt
cctccacaaggtatgtgggtagggactttccacggtttagcgcatcgcttattgcgtgct
cattggcgtgatgctggactcaaagaaaacttccagattatggacagcgatgaccagcta
cgcttaatcaaacgtatcatgcgtgaattgaatatcgacgatactcgctggccgcctaag
caggtatcttggtttatcaatgcacaaaaagacgaaggccgtcgtgcagctcatgtacca
gacagccatgatcctttctccaaaggcatgcgcgagctgtattaccattacgaagaagct
tgtgaacgtggtggattattggacttcggcgagttgctattgcgcgctcatgagctgatg
ctcagtacgccagctttgttgcgtcactatcaagagcgttttcgtcacgtgctggtggac
gagtttcaagataccaataccgttcaatatgcttggttgcgtattatggtgggtgatcag
ggcacgattaccgcggttggcgacgacgatcagtctatctatggttggcgtggggccaaa
atcgaaaacattcaccacttcagcaagcattttaaagacgtgcaaaccatacgtttagag
caaaactaccgttctactgggcacattttaaacgccgccaatggcttgattaagcacaac
gatgatcgtcttggtaaggagctttggaccgacagtggtgaaggcgagcctatttctctt
tatgctggctttaatgaacaagacgaagcgcgttttatcattggcattatcaaacaatgg
cgggataagggaacggtgttgtctgacatggcgattctgtatcgctccaatgctcagtct
cgtgttatcgaggaatgcttggttagggaacagattgcttatcggatttatggtgggcac
agattctatgaccgccttgaaatcaaaaatgccttggcctatgcacgtttggcgttggat
ccgaatgacgatggcgcgatggagcgggttattaacgttccgcctcgtggtattggtgaa
cgtagcattggaaccttgcgtgaaatcgcccgtgataacggctgttctatgtggcaagcc
gcgcaggaagtggtgcgtcaatccttgatgccgggccgcgcgaccaacgccattaaaacc
tttttgcatcttattgagggtttaagcaccacggtgcagcaacccgatttgaacttgaac
gacatttttgagcagatcattgaagaagcgggtttgattcctttccatgagaaagagaaa
ggcgagaagggcgaagcgcggattgaaaacttaaaagaattggtgggggctgcaggagga
tttagttggaacgatgaggacgaagagtttagttcaccgctgatggcgtttttggacaaa
gcggtgttggacgcgggcgatgcgcaagcggatgaatatcaagacgcggtgcagttgatg
accttgcattcggcgaaaggtctagagtttccattggtgtttttaactggggtggaagaa
aatctgtttccgagcaagatgtcgtttgaagaaccaggacgcttagaggaagagagacgc
ctttgttatgtaggcattacccgagctatggaaaagctttacatcacttatgcggaatcc
cgtcgtttgtttggcagtgagtcgtttaatagcccctctcgttttatcaaagaaatccca
ccgcagtgtttggaggaagtgcgtctgcgttcgcaagtgagccgtcctgtgtcattgcag
cgcccagactaccagtctgaaaagaataaattgcaaaacagcagtttgttaaacaactat
aaagcgccagaagtgacggtgaatatgggcgatcgagtgaatcaccctgtgtttggtgaa
ggcttagtgatcaattacgaaggccaaggcccacaagcacgcgtacaggtcaattttgat
gacgagggcactaagtggctggtattgtcgtttgctaaactggaagtactctag
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