Maribacter sp. MJ134: EJ994_00900
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Entry
EJ994_00900 CDS
T05877
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mare
Maribacter sp. MJ134
Pathway
mare03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mare00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJ994_00900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mare03019
]
EJ994_00900
03016 Transfer RNA biogenesis [BR:
mare03016
]
EJ994_00900
Enzymes [BR:
mare01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EJ994_00900
Messenger RNA biogenesis [BR:
mare03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EJ994_00900
Transfer RNA biogenesis [BR:
mare03016
]
Prokaryotic type
tRNA degradation factors
EJ994_00900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AZQ57433
UniProt:
A0A3S9NNE8
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All DBs
Position
complement(194866..197094)
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AA seq
742 aa
AA seq
DB search
MIPKVFREVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYKQSDVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHSETQVMIQLMS
HDEDVMPDAMAGLAASAAIQLSDFPFECAISEARVGRVNGEFVINPTRAQLAESDIDMMI
GASADSVMMVEGEMDEISEEEMTEAIKFAHEAIKVQCAAQVKLAEAFGKKEVREYEGERE
DADLAKKIHDMAYDKVYAIAKAGSAKHERSAAFSEIKDEIKASFSEEEQEDFGALISKYY
YKAEKAAVRDLTLNEGLRLDGRKTDEIRPIWCEIDYLPSTHGSAIFTRGETQALATVTLG
TSRDANKIDMPSHEGEENFYLHYNFPPFSTGEARPIRGTSRREVGHGNLAQRALKGMVPD
DCPYTVRVVSEVLESNGSSSMATVCSGTMAMMDAGVQLKKPVSGIAMGLISDVDSGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVNALQQARAGRLHILEKL
TDTIAEPAADVKPHSPKMVTRTIPNEFIGALIGPGGKVIQELQKETGTTIVINEDPVTEE
GIVEILGTDQNGIDAVLSKIDSLMFKPQMNESYKVKVIKMLDFGAVVEYLDAPGNETLLH
VSELAWERTENVTDVVNMGDEFEVKYLGTDPRTRKEKVSRKALLPKPEGYVERPPRSNDR
NRGGRDDRRGGRDNRDRKPRRD
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaagtatttagagaggtcatagaccttggagacggtagggaaatttctatc
gaaaccggaaaattagcaaaacaagcccatggctctgtggttgttcaatccggaaaatgt
atgttattatgtacggtagtttctaactacaaacaaagtgatgtagattttcttccacta
accgtagattaccgtgaaaaattcgctgctgcagggcgttaccccggaggttttttcaaa
agagaagccagaccaagtgacggcgaagtattaaccatgcgattggtggatcgtgtttta
cgtccgcttttcccaaaagattatcactctgaaacacaggtgatgattcaattaatgtct
catgacgaagatgttatgccagatgcaatggcaggtttagctgcatccgcggctattcag
ttatccgattttcctttcgaatgtgctatttcagaagcacgagtagggcgtgtaaacggc
gaattcgtcattaacccgactagagcgcaattagccgaatctgatattgacatgatgatc
ggtgcttctgctgattctgttatgatggttgaaggtgaaatggatgaaatttccgaagag
gaaatgacagaggctatcaaatttgcccatgaagcaattaaagtacaatgtgcagcacaa
gttaaactggctgaagctttcggcaagaaagaagtacgtgaatatgaaggcgaaagggaa
gatgctgatttagctaaaaaaattcatgatatggcatatgacaaagtgtatgctatagca
aaagctggttctgccaagcatgaaagaagcgctgcctttagcgagataaaagatgagatt
aaagcttctttttctgaggaagaacaagaggattttggcgctctcatttctaaatactac
tataaagctgaaaaagctgcggttcgtgaccttactttaaacgaaggtctgcgtttagat
ggtcgtaagaccgatgagattcgcccaatctggtgtgaaatcgattacttaccatcaacg
cacggttctgccatctttacccgtggtgaaacgcaagcattggcaacagtaactttaggt
acctctagagatgccaataaaatagatatgccatctcatgaaggcgaggagaatttctat
ctacactataacttccctcctttctctactggtgaggcaagacctattcgtggaacatcc
cgtagagaagttggtcatggtaatctagcgcaacgtgcattaaaaggaatggttcctgat
gattgtccatataccgttcgtgtagtttcagaggtattagaatctaacggttcttcttct
atggctaccgtttgttcgggtacaatggccatgatggatgcaggtgttcaattgaaaaag
ccagtttccggtatcgccatgggactaatttccgatgtagattcaggtaaatatgccgtt
ctttcggatatcttgggtgatgaagatcacttgggagatatggactttaaagtaactggt
accgcagatggtatcacggcttgccaaatggatatcaaggtcaaaggattgtcctacgag
attttggtaaatgcactacaacaagctagagcaggtcgtttacatattttagagaaatta
acggatacgattgctgaacctgcagctgatgtgaaaccacattctccgaaaatggttacc
cgtactattcctaatgaatttattggtgcacttattggaccgggtggaaaagtgattcaa
gaacttcaaaaagaaacgggaacaactatcgttataaacgaagaccctgttacggaagaa
ggtattgttgaaatattaggaacggaccaaaatggtatcgatgctgtgcttagtaagata
gattctttgatgtttaaacctcaaatgaacgaatcttataaagtaaaagtgatcaagatg
ttagattttggtgccgttgtggaatatcttgatgctccaggcaacgagactttattacac
gtatcggaattggcatgggaacgtacggaaaatgttaccgatgtcgtaaacatgggagat
gagtttgaagtgaagtatttaggtacggaccctagaacacgtaaggaaaaagtttcgcgt
aaggcacttttaccaaaaccggaaggttacgtagaaagaccaccaagaagcaatgataga
aatcgtggtggacgagatgacagacgcggaggtagagataaccgtgaccgcaaaccaaga
agggattaa
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