Maribacter sp. MJ134: EJ994_02855
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Entry
EJ994_02855 CDS
T05877
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mare
Maribacter sp. MJ134
Pathway
mare03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mare00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJ994_02855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mare03019
]
EJ994_02855
Enzymes [BR:
mare01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EJ994_02855
Messenger RNA biogenesis [BR:
mare03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EJ994_02855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
AZQ57791
UniProt:
A0A3Q9FI08
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All DBs
Position
complement(678927..680240)
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AA seq
437 aa
AA seq
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MTFKELGLAEPILKALEAEGYTTPTPIQEQAIPILLKGKDLLGVAQTGTGKTAAFGIPIL
HHLYEGISLRQNKRKIKALVVTPTRELAIQIGESFTAYGKHTGLRNTVIFGGVKQGKQVN
ALRGGIDILIATPGRLLDLMNQGFITFRDLEFVVLDEADQMLDMGFIHDIKKIIAKLPPQ
RQSLFFSATMPKTIVELSTKMLGDFERVTIKPEQATAEKVEQGVYFVSKPNKPKLLVHLL
QEKLNESVLVFSRTKHGANKIVKKLAQADIRSAAIHGNKSQAARQKALGAFKDGKLKVLV
ATDIAARGIDVEELSLVVNYDLPNVSETYVHRIGRTGRASASGIALSFCDLEERAYLRDI
EKLIKQQVPRMPEHPFTDADSEQESPSQPRIPKSSNRTRNNKNKNRSGNSNFRGRNNRNS
NNNRNRNKGGSSEKSNS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacttttaaagaactcggccttgccgaacctatactaaaagccttagaagcagaaggc
tataccacaccgacacctattcaagaacaagcgattcctatcttattaaaaggaaaggac
ctattgggcgttgcccaaacgggaaccggtaaaacagctgcttttggtattcccattcta
caccatttgtacgaaggaatttcattgcgccagaataagcgtaaaattaaagcccttgtg
gtaacaccaacacgagaactcgccatacagataggagaaagttttaccgcttatggcaaa
catacgggcctacggaacactgttatttttggtggggtcaaacaaggcaaacaggtaaat
gcactacgaggaggtatagatattctcattgccactccaggtcgtttattagaccttatg
aaccaagggtttatcacatttagggacctagaatttgttgttttggatgaggccgaccaa
atgctggatatgggctttatacatgatattaaaaaaattattgcaaagctacctcctcaa
agacagtcgctatttttctcggccaccatgccaaaaaccatagtggaactttccaccaaa
atgctgggggattttgagcgggtcactataaaacccgaacaggcaacggcggaaaaggtg
gaacaaggggtctattttgtaagcaaacccaacaaacctaagttattagtgcatctttta
caggaaaaactgaacgaatccgttcttgttttttcacgtaccaaacacggtgctaacaag
attgtgaaaaaactggctcaggcggatatacggtctgcggcaattcatggaaataagtcg
caggcagctaggcaaaaggcattaggtgctttcaaggacggaaaacttaaagttcttgta
gccaccgatatcgcagctcggggcatagatgtggaagaactttccctagtggtgaactat
gacctacctaatgtttcggaaacatatgtgcatcgtatcggtagaacggggcgtgccagc
gccagtggtatcgcgctgtcgttttgtgatttggaagaacgtgcctatttaagggacata
gagaaacttataaaacaacaggttccccgtatgccagaacatccttttacggatgcagat
tccgagcaagaaagtccaagtcagccaaggataccaaaaagttctaatcgcactagaaat
aacaaaaacaaaaaccgttctggaaattcaaattttagaggaagaaacaacagaaactcc
aacaataacagaaacagaaacaagggagggtcgtccgaaaagtcaaactcctag
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