Maribacter sp. MJ134: EJ994_09115
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Entry
EJ994_09115 CDS
T05877
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mare
Maribacter sp. MJ134
Pathway
mare03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mare00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EJ994_09115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mare03021
]
EJ994_09115
03400 DNA repair and recombination proteins [BR:
mare03400
]
EJ994_09115
Enzymes [BR:
mare01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EJ994_09115
Transcription machinery [BR:
mare03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EJ994_09115
DNA repair and recombination proteins [BR:
mare03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EJ994_09115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
Fungal_KA1
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AZQ58958
LinkDB
All DBs
Position
complement(2076389..2077381)
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AA seq
330 aa
AA seq
DB search
MALFNFQKPDKVIMIDSSDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGHAITSVRID
KVEHEFSVISGVVEDVTEIILNLKQVRFKKQIEDSEAEVVSISVSGKDQLTAGDFQKFIS
GYQVLNPDLVICNMDAKVSINMEITIDKGRGYVPAEENKKSGAPMGTIAVDSIFTPIKNV
KYSIENYRVEQKTDYEKLVFEIVSDGSIHPKDALTEAAKVLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVINKGLSFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattatttaattttcagaaacccgataaagtaataatgatcgattcctcagatttc
gaagggaaatttgaatttcgtcctttggaacctggttatggattaactgttgggaatgca
ttaagaagggtattgctttcttcattagaagggcatgccatcacatccgtaaggattgat
aaagtagaacatgagttctctgtaatatctggtgttgtagaagacgtaaccgaaattata
ttgaatttaaaacaagttcgttttaagaagcaaatcgaggattccgaagcggaagttgtt
tcaatatccgtaagtggtaaagatcagttgaccgctggggatttccagaagtttatttct
ggttaccaagtgcttaatcctgacttggtcatctgtaatatggatgctaaggttagcatc
aacatggaaatcacgattgataaaggtaggggctatgttcctgccgaagagaacaaaaag
tcgggagctccaatggggactatcgctgtggactctatttttacaccaattaagaatgta
aagtatagtattgaaaactatcgtgtagaacaaaaaaccgattatgaaaagttggttttc
gagattgtttctgatggttctattcacccaaaagatgctttaactgaggcggccaaggtg
ttaatacatcactttatgcttttctctgatgaaagaattacgctggaagctgacgaaata
gctcaaacggagacttatgatgaagagtccttacatatgagacaattgttaaaaaccaag
cttgtggatatggatttatccgttcgtgctttgaattgtttgaaagcggcagaagttgat
acgcttggagatttggtgtctttcaataaaaacgatttgatgaaattcaggaacttcggt
aaaaagtcgttgacagagctagaagaacttgttattaacaaaggacttagctttggaatg
gatttgtcaaaatataaattagataaggattaa
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