Maribacter sp. MJ134: EJ994_11015
Help
Entry
EJ994_11015 CDS
T05877
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mare
Maribacter sp. MJ134
Pathway
mare03030
DNA replication
mare03430
Mismatch repair
mare03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mare00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJ994_11015
03430 Mismatch repair
EJ994_11015
03440 Homologous recombination
EJ994_11015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mare03032
]
EJ994_11015
03400 DNA repair and recombination proteins [BR:
mare03400
]
EJ994_11015
Enzymes [BR:
mare01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EJ994_11015
DNA replication proteins [BR:
mare03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EJ994_11015
DNA repair and recombination proteins [BR:
mare03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EJ994_11015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Cytochrom_C_2
Motif
Other DBs
NCBI-ProteinID:
AZQ59311
LinkDB
All DBs
Position
2549799..2554184
Genome browser
AA seq
1461 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPYTDTDNWPRCIQIAWQLHDDMGRLVEHQDYLVRPDGFNIPY
DAEQIHGISTELASQKGISLSEVLEKFNVAMSKTKFIVGQNVGFDLNIMGAEFHRMGVDN
PLQDLPVLDTCTEHTAQLCQIPGGRGGKFKLPTLTELHQHLFGKPFGEAHNATADVEATT
RCFLELVRLRQYTTEQLDVQPDYFKNFSEANPEEIQLIGLKHINLKKASKKIADALWEKD
TGGVSQEEINENIKTLEDATFVHLHNHSQFSVLQSTINIKSLVQAAADNQMPAVGLTDHA
NMMGAFHFVKEISAHNKAVKEKNKEAEETGAETQLKEITPIIGCEFFVCEDHTNKSVKDY
GYQMVLLAKNKKGYHNLAKMSSIAYTDGFYYVPRIDKKVIQKYKEDIIVLTGNLYGEVPS
KVLNVGENQAEEALLWWKAQFGDDLYIEMMRHGQEDEDRVNQVLVEFSKKHGVKLVATNN
TYYCNKEDAEAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSQEEMKEQFKDVPE
AILNVQEIVDKIEPFELARDVLLPKFDIPDDFKDPEDAIDGGNRGENAYLRHITYEGAKK
RYAEITEEIRERIDFELDTIKNSGYPGYFLITEDFIREARNMDVSVGPGRGSAAGSVVAY
CLTITNIDPLKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVINKYGANQVAQIIT
YGTMAAKSSIRDTARVLDLPLGDADRIAKLIPTMSKLGKIFGKSDAELKKKFRAEDLEKI
HQLLNIHDGDDLEGQTLKMARTLEGSVRNTGIHACGVIITPDDITNFVPVATAKDSDLYV
TQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKAKHGIDLVPDDFPLDDEKTYELFQK
GETVGVFQYESPGMQKHMKDLKPSVFDDLIAMNALYRPGPMEYIPSFIARKHGDEEIAYD
LPDMEEYLKETYGITVYQEQVMLLSQKLAGFSKGDADVLRKAMGKKIFAVLQKMKPQFLE
GGAANGHPTEVLEKIWKDWEAFAAYAFNKSHSTCYAYIAYQTAYLKAHYPAEYMAAVLSN
NMNDIKQVTFFMEECKRMGLDVLGPDVNESYYKFAVNKEGAVRFGMGAIKGVGRSAVETI
VEHRKKDGNFHSVFDLAKRIDLRAANKKAFENLAVAGGFDSFGTTHRAQYFHTEGDGITF
LEKVIKSAAKYQENKNSSQMDMFGGMSEAQIPEPIVPPCEEWGTMEKLRREKEVVGIYIS
GHPLDDFKTEIKAFCNAGISHINDMASYVNRELTFAGVITDVQHRISKNGKGWAAFTMED
YTDSFEFRIFGEEYLKFRHFLMINSFAYVKIFIREGWVNRETGKKGDPRMQFNSFMLLQD
VMETYARKLTIKLNIDELKEEGIHQLKDTLVSHKGNHPLNFVIYEMEEEIKVNLSSRKQK
VEITSELLHILEEQEVHFKLN
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatctttgataccgaaaccacaggtcttccaaaacgttgggatgcaccctac
acagatacggacaactggcccagatgcattcaaatcgcttggcagttgcatgacgatatg
ggtcgccttgttgaacatcaagattatctagtacgcccagacggcttcaatattccgtat
gatgcggagcaaatacatggtatctctacagaactagcttcacagaagggcatttcctta
agcgaggttttggaaaagtttaatgtggccatgtccaagaccaaatttattgtgggtcaa
aacgtagggttcgatttaaatatcatgggagcggaatttcaccgtatgggcgttgacaac
ccgttacaagacctacccgtcctagatacctgtaccgaacatacggcacaactctgtcaa
atccctggaggccgtggcggaaaatttaagctacccacgcttaccgaactgcaccaacat
ctctttggcaaaccctttggcgaggcacataatgccactgccgacgttgaagctactacg
cgatgttttttggagttggtacgcttaaggcagtataccaccgagcaactagacgtacag
ccagattattttaagaacttctccgaagccaatcctgaggaaatacagctgatcggtcta
aaacacattaacctaaaaaaggcctctaaaaaaattgcggacgccctttgggaaaaagat
acgggtggtgtttcgcaagaggaaatcaatgagaatataaaaacactggaagatgcgacc
ttcgttcatcttcacaatcactcccagttttcggtattgcaatccaccatcaatatcaaa
tcacttgtacaggcagcagcggataatcaaatgcctgcggtgggtttaacggaccatgcc
aatatgatgggtgcctttcattttgtaaaggaaatcagtgctcataataaagcggtaaag
gaaaaaaacaaggaagcggaagaaacgggagcagaaacgcaactaaaggagataaccccg
attattggttgtgagttttttgtttgtgaagaccataccaacaaaagtgtaaaggattac
ggatatcaaatggtgctcttggccaagaacaagaagggatatcacaacctcgccaaaatg
tcctccatcgcatacacggacgggttttactacgtgccacgaatcgataaaaaggtaatt
cagaagtacaaggaggatatcattgtccttaccggaaatctttatggggaagtccccagt
aaagtcttgaatgttggtgaaaaccaagcagaagaggcacttctttggtggaaagcccaa
tttggagacgatttatatatagaaatgatgcgtcacggacaggaagatgaggaccgtgtg
aaccaagtcttggtggagttttccaaaaaacatggcgtaaagcttgtggctactaataac
acctactattgcaataaggaagatgcggaggcgcacgacatattactatgtgttaaagac
ggtgaaaaacaagctacgcctataggccgtggtcgtggatatcgttatggcctgcccaat
caagagtattactttaaatctcaagaagagatgaaggaacagttcaaagatgttccggaa
gccattttgaacgtgcaggaaattgtagataagattgagccatttgaactggcacgggac
gtgctcttacctaaatttgacatccccgacgatttcaaagaccccgaggatgcaattgat
ggcggtaaccgcggtgaaaatgcctatctaaggcacatcacttacgaaggtgcgaaaaag
cggtatgcggagataaccgaagaaatacgcgaacgcatcgattttgaattggataccatt
aaaaattcgggatatcccgggtattttctgattaccgaagattttatcagagaggcaaga
aacatggatgtttccgtgggtccaggtcgtggctccgccgcaggctccgtagtcgcctat
tgtttgaccattaccaatattgaccctttaaaatacgatttactttttgagcgtttcctg
aatccggatagggtatccatgcccgatattgatattgattttgatgacgaaggtcgtggg
cgtgttatggactatgtcattaataaatacggcgccaaccaagtagcgcagattatcact
tatggaaccatggcggccaagtcctctatcagggatacggcccgtgtactggacctgccc
ttgggtgatgcggataggattgcaaaacttattcccacgatgtcgaaattagggaagatt
tttggaaagtccgacgctgaactgaagaagaaattccgtgcggaggatttggaaaaaatc
catcaacttttaaatatacatgatggggacgaccttgaaggtcagaccctaaaaatggca
cgaactttagaaggttctgtaagaaacacaggaatacacgcttgtggggtaatcataaca
ccagatgacattaccaattttgtgcccgtagcaacggcgaaggattcagacctatacgtc
acacaattcgataactcggtcgttgaaagtgccggtctgctgaagatggatttcttaggg
cttaaaaccttaacattgatcaaggataccgtcaaaattgtaaaggcaaaacatggtatt
gatttagtaccggacgattttccgttggatgatgaaaaaacgtatgaactcttccaaaaa
ggagaaaccgtaggggttttccaatatgaatctccaggtatgcaaaagcacatgaaggat
ttaaaaccctctgtttttgacgacctcatcgccatgaacgcgctgtaccgacccggtcct
atggagtatatccctagcttcatcgccagaaaacacggtgatgaagaaatagcgtacgac
cttccggacatggaagaatatctcaaggaaacttacgggattaccgtttatcaagagcag
gtgatgctcttgtcacaaaagttagccggtttctccaagggtgatgccgatgtactccgt
aaagccatggggaaaaagatatttgcggtgctccaaaaaatgaaacctcagttcttggaa
ggaggcgcagccaatgggcaccctaccgaggttctggaaaaaatatggaaagattgggaa
gccttcgcagcctatgcatttaacaagagtcactccacttgctatgcctacatcgcctac
caaacggcctatttaaaagcccactacccagcagaatacatggctgcggtattgagtaat
aatatgaacgacattaaacaggttaccttctttatggaagaatgtaagcgcatgggcttg
gacgttttaggaccggatgtaaacgaatcttactataagtttgcggtaaacaaagaagga
gccgtacgttttggtatgggggccattaaaggcgtaggtcgttctgccgtggaaactatc
gtggaacatcgtaaaaaagatgggaatttccattctgtttttgatttggccaagcgtata
gacctccgtgccgccaataagaaagcttttgaaaaccttgccgttgcaggtggtttcgat
tcttttgggaccactcatcgagcccaatattttcacacggaaggcgatggcatcactttt
ttggaaaaagttatcaagtctgcagcaaaatatcaagagaataaaaattcttcccagatg
gatatgttcggaggaatgagcgaggcacaaatccctgaacccattgtaccaccatgtgaa
gaatggggcaccatggagaaactgcgacgggagaaagaagtggtaggtatttatatttcc
ggacatcccttggatgattttaaaacggaaataaaggcgttctgcaatgcgggtatttcc
catattaacgacatggccagttatgttaaccgagagctcacttttgctggagtaattaca
gatgtgcaacatcgtatttccaagaacggtaaaggatgggccgcctttaccatggaagat
tatacagactcatttgagttccggatttttggtgaagaatatttaaaattcagacacttt
cttatgataaattcctttgcctatgtcaaaattttcattcgcgaaggttgggtaaatagg
gaaacaggtaagaaaggggaccctagaatgcagttcaatagttttatgttgcttcaagat
gttatggagacctatgccagaaagcttaccataaaattaaatattgatgaattaaaggaa
gaaggtattcaccaattaaaggacacattggtttctcataaaggaaaccaccctttaaat
tttgttatctatgaaatggaagaagagataaaggtaaatttatccagcagaaaacaaaaa
gtagagattacaagtgaactcttacatatccttgaagaacaagaggtacattttaaatta
aactaa
DBGET
integrated database retrieval system
