Maribacter sp. MJ134: EJ994_15775
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Entry
EJ994_15775 CDS
T05877
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mare
Maribacter sp. MJ134
Pathway
mare03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mare00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJ994_15775 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mare03019
]
EJ994_15775 (recQ)
03400 DNA repair and recombination proteins [BR:
mare03400
]
EJ994_15775 (recQ)
Enzymes [BR:
mare01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EJ994_15775 (recQ)
Messenger RNA biogenesis [BR:
mare03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EJ994_15775 (recQ)
DNA repair and recombination proteins [BR:
mare03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJ994_15775 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Sigma70_r4_2
HTH_23
GerE
HTH_11
HTH_29
HTH_20
HEM4
Helicase_Sgs1
HTH_22
GcrA
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AZQ60188
UniProt:
A0A3S9NW29
LinkDB
All DBs
Position
3640209..3642302
Genome browser
AA seq
697 aa
AA seq
DB search
MAMTVNKESTLLPLLKTHFGYDNFKPNQLAIIQDVMAKKDVLAIMPTGGGKSLCYQLTAL
ALEGTAIVISPLIALMKDQVDVLKANGISAAYYNSSQTEETQQAIFKQLKEGQLKLFYIA
PESLGFVHGVLETIPISIFAIDEAHCISSWGHDFRPAYTQLGGLKKRFSNVPIIALTATA
DKTTQEDIVDQLNVPEAEQHLASFNRPNIFLEVKPAQDRIRHILEFLQERPNESGIIYCL
SRKSTETIAAKLVASGFKVQAYHAGMSAEERNEAQEDFITDKTPIVVATIAFGMGIDKSN
VRWVIHYNLPKNIEGYYQEIGRGGRDGLPAHALLFYSFGDVAQLRRFIFTSENATVEYAK
LERMQQFAEALSCRRIALLNYFGEQVTEGCGNCDICKQPPAYFDATVLAQKICSAVARLR
EREPMGVVIDVLRGAQNAQVLEKGYQNIKTYGAVKDISWQDLQQYVIQLLNKGVLHINFK
EGARLGLTPLAKEVLYNKKEVQLATLQKVADRPKRELKARSSKTGLFEKLRVLRHEIATA
EGVPAYVIFGDASLKDMELKLPKNETEFLQVSGVGQAKLEKYAAIFLKEIAAHAPSKKSK
VATHLKSLQLFKEGLSIAEIAEQRAISENTVYGHLVKANMEGKSIDLHQFLTAEELDSIA
DAKEDLEGVESLKAFVEYFEEKIPYWKLKIGLYLLDE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgacagtcaataaagaaagtactttactaccattactaaagacacatttcgga
tacgacaattttaaaccgaatcaattggcgattattcaggacgtcatggccaaaaaagat
gtcttggccattatgcccacaggtggcggcaaatctttatgctatcagttgaccgcattg
gcactagaaggcacggcaatagtgataagtccgttaattgccttaatgaaagatcaggta
gatgtgctcaaagccaatggtatttcagccgcttattataatagttcacaaaccgaggaa
acacagcaagccatatttaaacaactgaaggaagggcaattaaaactattctatatagca
ccggaaagtttaggatttgtacacggcgttttggaaaccatacccataagcatctttgcc
atagatgaagcgcattgcatctcttcttgggggcatgattttagacctgcctatacgcaa
cttggtggcctaaagaagcgattttcgaacgttcccatcatagccctaacggcaacggcg
gacaagaccacacaagaagatatagtggatcaacttaatgttccggaagcagaacaacac
ttggcctcattcaataggcctaacatatttttagaggtaaaacccgctcaagaccggata
cgtcatattctcgaatttctgcaggagcggcccaatgaaagtggtattatttattgcctg
agcagaaaaagtacggagactatcgcggctaaactggttgcctcaggtttcaaggtacag
gcctatcatgctggcatgtccgctgaggagcgtaatgaagcccaagaggattttataacg
gataaaacacctattgtagtcgctaccattgcttttggaatgggtattgacaaaagtaat
gtacgttgggtgatacactacaaccttcccaaaaatatcgagggatattatcaggagatt
ggccgcggagggcgagacggacttcccgctcatgccttattattctatagttttggtgat
gttgcgcaactgcgtcggtttatcttcactagtgaaaatgcaactgtggaatatgcaaaa
ctagaacgaatgcaacaatttgcagaagccctaagttgtcgtagaatagcgttgctcaat
tattttggtgaacaggttacagagggctgtggcaattgtgatatctgtaagcagccgcct
gcatattttgatgctacggtattggcgcagaaaatttgttctgcggttgcccgtttaagg
gaacgagagcccatgggcgtcgttattgatgtgctaaggggagctcaaaatgcccaagtt
cttgagaaaggttatcaaaacattaagacctacggggccgttaaggatatttcttggcaa
gacttgcagcaatatgtcatacaactattaaataagggggtattacatatcaattttaaa
gaaggagctagattaggacttactccgttagctaaagaagtgctttacaataagaaagaa
gtacaattggcgacattgcaaaaagtagctgataggccaaaacgagaattaaaggcgcgt
agttccaaaacagggcttttcgaaaaacttagggtcttacgtcatgagattgccacagcg
gaaggagttcctgcctacgtaatttttggcgatgccagtttaaaggatatggagttaaaa
ttacctaagaatgaaacggagtttctgcaagtttctggggtagggcaggctaagctggaa
aaatatgctgccatttttttaaaagaaatcgcagcacatgcgccgagtaagaaatcaaaa
gtggcaacacatctgaagtctttacaactatttaaagaaggcttgtccatcgctgaaatt
gccgagcaaagggctatttctgaaaatacggtctatggacatctggtaaaagcaaacatg
gaaggcaaatcaattgatttacatcaatttttaacagcggaagaattggatagcatagcc
gatgccaaagaagatttagaaggcgtagaaagtctcaaagcctttgttgaatattttgaa
gaaaaaataccctattggaaattgaagataggattgtatttgttggatgaataa
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