Maribacter sp. MJ134: EJ994_16620
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Entry
EJ994_16620 CDS
T05877
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mare
Maribacter sp. MJ134
Brite
KEGG Orthology (KO) [BR:
mare00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mare03032
]
EJ994_16620
03400 DNA repair and recombination proteins [BR:
mare03400
]
EJ994_16620
Enzymes [BR:
mare01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EJ994_16620
DNA replication proteins [BR:
mare03032
]
Prokaryotic type
DNA Topoisomerases
EJ994_16620
DNA repair and recombination proteins [BR:
mare03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EJ994_16620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AZQ60349
UniProt:
A0A3S9NWL4
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All DBs
Position
complement(3846709..3847782)
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AA seq
357 aa
AA seq
DB search
MIYQFINEPEDAVAHLNLKYVHKDELPILRLKNGKTFEYLFNNRPLAKQDELQRIKELVI
PPAWENVQISDLSNAHLQAFGYDLKKRIQYRYHPLWLRIRNRTKFYRMSAFGKVLPELRS
KVDTDLALPGWPRNKVLALVVRLMEETHIRIGSRQYAKRNKTYGLSTLRTKHVSVHKEKV
RFKFTGKKGKKHDITLRNKKLIKLVSKCEEIPGWELFQFFDKDGSKTAIDSGMVNDYIQQ
AVGDAFTAKDFRTWAGTVIFFDSLRSFPKTCDPKILHSNTLRAYDVVAKELGNTRNVCRK
YYVHPLLPLEYEKGNLTEVFENVDTTTHSPNQSASEAVLLKLIQEYSPLQDIKKNIA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atcatatatcaattcatcaatgaacctgaggatgccgttgcacacctgaacctaaaatat
gtgcataaggatgagttacccattctacgcctaaaaaatggtaagacctttgagtatctt
tttaacaaccgtcctttggcaaaacaagatgagcttcaacgtattaaggaactggtaatt
ccaccagcttgggaaaatgttcagatttctgatttgagcaatgcgcacttacaggctttt
ggatacgatttaaaaaaacgaatacaataccggtatcatccgctttggttaagaataaga
aataggaccaaattctatagaatgtccgcctttggcaaggtcttacccgaactaagatca
aaagtagatacggacctagctctcccaggttggcccaggaataaagtcttggcattagtg
gtaagacttatggaggagacacatattaggataggtagcagacagtacgccaaaagaaat
aaaacttacggcctctctacacttagaaccaaacatgtctccgtccataaagagaaagtc
cgatttaagtttactggaaagaagggcaagaagcacgacatcacactgaggaataaaaag
ctaattaaacttgtaagtaaatgcgaggaaatccctggttgggagctattccaatttttt
gataaggacggaagtaaaacggccatagacagtggtatggtcaatgattatatacaacaa
gccgttggagacgcctttactgcaaaagatttcagaacttgggcaggaaccgtaatcttc
tttgactcacttaggtcgttcccaaagacttgtgatcctaaaatattgcattccaatacg
ctaagggcttacgacgtggtagccaaggagctcggaaatacaagaaatgtttgccgcaaa
tattacgtacacccgctacttccactggaatatgaaaagggaaacttgactgaagttttc
gagaacgtcgatacaacgacccatagtcccaatcaatcggcatcagaagccgttttgctg
aagttaatacaagagtatagtccattacaggatattaagaaaaatatagcatga
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