Mariniflexile rhizosphaerae: CJ739_1069
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Entry
CJ739_1069 CDS
T05592
Name
(GenBank) Oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
marf
Mariniflexile rhizosphaerae
Pathway
marf00040
Pentose and glucuronate interconversions
marf01100
Metabolic pathways
marf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
marf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CJ739_1069
Enzymes [BR:
marf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
CJ739_1069
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase22
Tricorn_N
PD40
Rabaptin
CRISPR_Cas2
Motif
Other DBs
NCBI-ProteinID:
AXP80162
LinkDB
All DBs
Position
1218139..1219407
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AA seq
422 aa
AA seq
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MKPIKTLLLFLILISFSCKGKLTKSDAAKDAKTTSIQIPIMQTSKASSLAKVWIDSTTGH
KIEKLVNRAGDNRSFYFHNNPFLKSEDGNSDLMIFSGSTETGNQFFSVNLKTKNIDQITT
RKGHKRGEILGKKTRKVFYMIQDSVFATHIDTHKTEFIYKFSNDVIGSVTSLNADETLLG
GALITKEENDIFKKNPKKSDYFDKIYEAKLKRSLITIHVNTKEFNKIYSENAWLNHIQFS
PTDPDLLMYCHEGPWHKVDRIWNIHIKTKKNELIHKRTVYREIAGHEFFSPDGNTIWFDL
QIPRGETFYLAGKHLDTGEETKYALKRDEWSIHFNISPDQKTFAGDGGDEGQVAHAKDGM
WLYHFTPKGDSLVSTKLANMKNHDYDLEPNVHFSPDGKQIIFRANFEGSTQIYAVDIEKP
SL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctattaaaaccctcctactattcttaattttgataagcttctcttgtaaagga
aaactaaccaaatcggatgcagccaaagacgctaaaacaactagcattcaaattcctata
atgcaaacaagcaaagcaagttcgttagctaaagtttggatagattctactaccggacat
aaaatagaaaaattggtaaatagagctggcgataaccgtagtttttatttccataacaat
ccatttttaaaatcggaagacggcaacagcgatttaatgattttctctggaagcacagaa
acgggcaaccagtttttttcagtcaatttaaaaacaaaaaacatagaccaaattaccaca
agaaaaggccataaaagaggtgagattcttggcaaaaaaacacgaaaagtgttttatatg
atacaagacagtgtttttgcaacccatattgatacccataaaactgaattcatttacaaa
ttcagtaacgatgttattggttctgtcaccagtttaaacgctgatgaaactttattgggt
ggcgctttaataaccaaggaagaaaacgatatttttaaaaagaatcctaaaaaatcggat
tattttgacaaaatttatgaagcaaagcttaaaagaagccttatcaccatccatgtgaat
actaaggaatttaataaaatttattctgaaaacgcttggttaaaccacatccaattttca
ccaacagaccccgatttattaatgtattgccatgaaggaccttggcataaagtagatcgt
atttggaacatccatataaaaacaaaaaagaatgaactaattcataaaagaaccgtttac
agagaaattgcgggtcatgaattttttagccctgacggaaacaccatttggttcgacctt
caaattcccagaggtgaaaccttttatttagcaggaaaacatttagatacgggagaagaa
accaaatatgccttaaaacgggacgaatggtctatacatttcaatatatcaccagatcaa
aaaacctttgctggcgatggtggcgatgaaggtcaggtggcccatgctaaagatggcatg
tggctttaccattttacaccgaaaggagacagtttggtttcaactaaattggcaaacatg
aaaaatcacgattatgatctagaaccaaacgttcacttttctccagatggaaaacaaatt
atttttagagccaattttgaaggaagcacacaaatttatgctgtagacattgaaaaacct
tccttataa
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