Mariniflexile rhizosphaerae: CJ739_1319
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Entry
CJ739_1319 CDS
T05592
Name
(GenBank) Very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
marf
Mariniflexile rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
marf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marf03400
]
CJ739_1319
DNA repair and recombination proteins [BR:
marf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CJ739_1319
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
AXP80410
LinkDB
All DBs
Position
complement(1511330..1511800)
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AA seq
156 aa
AA seq
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MVYNEDKIKVPRFNEESGFYTTKKRSKIMSKIGGKNTKPEMLFRKALWRKGVRYRVNNRK
LPGKPDVSIKKYKLAVFIDGEFWHGFNWNERKETIQSNRGFWIPKIERNMQRDKEVNQQL
IEMGYTVFRFWAKDIKTELDKCINDILVYIDVGENN
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggtttataatgaagataaaataaaagtccctcggtttaatgaggaatcgggtttttat
accactaaaaaacgctcaaaaataatgagcaagattggtggcaaaaacaccaagccagaa
atgctttttagaaaagcgctttggagaaaaggggtgaggtatagagtaaacaatagaaag
cttcccggaaaacccgatgtttccattaaaaagtacaaattagctgtttttattgatggc
gaattttggcatgggtttaattggaacgaacgcaaggaaaccatacaaagcaatcgtggt
ttttggataccaaaaatagaacggaatatgcagcgcgataaagaggtaaaccagcaactt
attgaaatgggctataccgtgtttaggttttgggcaaaggatattaaaaccgaactagac
aaatgcattaacgatatattggtttacatagacgttggagaaaataattaa
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