Mariniflexile sp. TRM1-10: CJ739_206
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Entry
CJ739_206 CDS
T05592
Name
(GenBank) Eukaryotic DNA topoisomerase I-2C catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
marf
Mariniflexile sp. TRM1-10
Brite
KEGG Orthology (KO) [BR:
marf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marf03032
]
CJ739_206
03400 DNA repair and recombination proteins [BR:
marf03400
]
CJ739_206
Enzymes [BR:
marf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CJ739_206
DNA replication proteins [BR:
marf03032
]
Prokaryotic type
DNA Topoisomerases
CJ739_206
DNA repair and recombination proteins [BR:
marf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CJ739_206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7656
Motif
Other DBs
NCBI-ProteinID:
AXP79306
UniProt:
A0A385BJM8
LinkDB
All DBs
Position
195844..196950
Genome browser
AA seq
368 aa
AA seq
DB search
MRLMKRNRMREADLQQLMNHPENIISKCNLTYTYEEDFPIVRKRHGKGFIYLMNGKPIQN
KQALKRIKNIVIPPMWKDVKISHLENSHLQAVGKDAKNRKQYLYHPKWKIIRNSTKFYKM
YSFGKKLPLIRKQLDIDLDKKGWPKEKVVALIIRLMEETHIRIGNSYYEKQNKSYGLTTL
RKKHINIYKGKLQIEYIGKKGIEHTVSLRNKKLVKLVNRCEELPGWTLFKYIDEDGIKKT
IKSSHVNEYLYTLCGSDFTAKDFRTWSASVSFFNALLELEKATSEKEIKSNILSAYDVAA
NTLGNTRNVCKKYYVHPIIIEQYENGNLYKIFDKIKKTTTVNNYLSPSEKEMLKLFKRYR
PLLQKEFK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaggttaatgaaaagaaatagaatgcgagaagctgatttacaacaattaatgaaccac
cctgaaaatataatttctaaatgcaatcttacttatacctatgaagaagattttccaatt
gttagaaaaagacatggtaaaggttttatttatcttatgaatggaaaacccattcaaaat
aaacaagcccttaaacgcattaaaaatattgtaattccacccatgtggaaagatgtaaaa
attagtcatcttgaaaatagtcatttacaagcggtgggcaaagatgccaaaaaccgaaag
caatatttatatcatcctaaatggaaaattataagaaattctaccaaattttataaaatg
tattcatttggcaaaaaactacccttaataagaaaacaacttgacattgatttagataaa
aaaggctggccaaaagaaaaagtggttgcattaataattcgcttaatggaagaaacccat
attcgtattggtaatagttattatgaaaagcaaaataaatcttatggtttaacaacactt
agaaaaaaacatattaatatctataagggcaaattacagattgaatatattggaaaaaaa
ggtatagaacatactgtttcgctgcgaaacaagaaattggtaaaattagtaaaccgatgt
gaagagctgcctggatggacactttttaaatatattgatgaagatggcataaaaaaaacc
ataaaaagcagtcatgtaaatgagtatctatataccctttgcggaagcgactttaccgca
aaagattttagaacgtggtcggcctctgtctctttttttaatgctttgcttgaattggaa
aaagccacttctgaaaaagaaataaaaagtaatattttaagcgcatacgatgtagcggca
aataccctaggcaatacgagaaatgtttgtaaaaaatattatgtacatcccatcattatt
gaacagtatgaaaatggaaacttgtataaaatttttgataaaattaaaaagacaacaaca
gttaacaactatttatcaccttctgaaaaagaaatgctaaaactttttaaaaggtatcgt
ccattacttcaaaaagaatttaaataa
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