Mariniflexile rhizosphaerae: CJ739_2195
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Entry
CJ739_2195 CDS
T05592
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
marf
Mariniflexile rhizosphaerae
Pathway
marf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJ739_2195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marf03019
]
CJ739_2195
03110 Chaperones and folding catalysts [BR:
marf03110
]
CJ739_2195
03029 Mitochondrial biogenesis [BR:
marf03029
]
CJ739_2195
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
marf04147
]
CJ739_2195
Enzymes [BR:
marf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CJ739_2195
Messenger RNA biogenesis [BR:
marf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CJ739_2195
Chaperones and folding catalysts [BR:
marf03110
]
Heat shock proteins
HSP60 / Chaperonin
CJ739_2195
Mitochondrial biogenesis [BR:
marf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CJ739_2195
Exosome [BR:
marf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CJ739_2195
Exosomal proteins of other body fluids (saliva and urine)
CJ739_2195
Exosomal proteins of breast cancer cells
CJ739_2195
Exosomal proteins of colorectal cancer cells
CJ739_2195
Exosomal proteins of bladder cancer cells
CJ739_2195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Antitox_RHH
Motif
Other DBs
NCBI-ProteinID:
AXP81276
LinkDB
All DBs
Position
complement(2541831..2543462)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGAPQVTKDGVTVAKEIE
LKDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVKDLEKQSKKVGNSSEMIKQVASISANNDDTIGDLIAKAFDKVGKEGVITVEEA
KGMETYVDVVEGMQFDRGYLSPYFVTDTDKMIVDLDNPYILLFDKKISNLQEILPILEPV
AQSGRPLLIVAEDVDGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENADLSMLGTAETVTIDKDNTTIVNGSGDADAIKGRVNQIKAQIEITTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKSVLEKITTENLDETTGIQIVARAIEAPLRTIVENAGGEGSVVVSKVMEGKGSFGYDA
KSETYVDMLKAGIIDPKKVTRIALENAASVAGMILTTECALIDIKEDAPAMPGGMGGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgcgacggtttaaaacgtggtgttgat
gcattagcaaatgcagtaaaagtaactttaggccctaaaggtcgtaacgttattattagc
aaatcattcggagcacctcaggtaactaaagatggtgtgactgtagctaaagaaattgaa
ttaaaagacgctcttgaaaacatgggcgcacaaatggtaaaagaagttgcttctaaaacc
aacgatttagccggcgatggtactacgactgcgaccgttttagcacaagctatcgtaaaa
gaaggcttaaaaaatgtggctgctggtgctaacccaatggatttaaaacgtgggatagac
aaagctgttgaagctattgttaaggatttagaaaaacaatcaaagaaagtaggtaactct
tctgaaatgattaaacaagtggcttctatttctgctaataacgacgatactattggcgat
ttaattgctaaagcatttgacaaagttggtaaagaaggtgttattactgttgaagaagct
aaaggaatggaaacgtatgttgacgttgttgaaggtatgcagtttgacagaggttatcta
tcgccttacttcgtaacagataccgacaaaatgattgtagatttagacaatccttatatc
ttattattcgacaaaaagatttctaacttacaggaaatccttcccatactagaaccagta
gcacaatctggtcgtccgttattaattgttgccgaagatgttgatggtcaagcattggct
actttggtggttaacaaattacgtggcggattaaaaattgcagctgtaaaagcaccagga
ttcggagacagacgtaaagccatgttagaagacatcgcgatcttaacgggtggtactgtt
atttctgaggaacgcggtttcactttagagaatgccgatttaagcatgctaggtaccgct
gaaactgttactattgataaagataacacgactattgtaaatggttctggtgatgccgat
gctattaaaggacgtgtaaaccaaataaaagcacaaattgaaatcactacaagcgattac
gataaagaaaaattacaagagcgtttagctaaattagctggtggtgttgcagtgctttat
gttggtgctgcttctgaagtagaaatgaaagagaaaaaagaccgtgttgatgacgcatta
cacgctacaagagctgctgttgaagaaggtattgttgccggtggcggtgttgccttagta
agagcaaaatcggttttagaaaaaattacaacggaaaaccttgatgaaacaacaggcatt
caaattgtagcacgtgctattgaagcacctttacgcaccattgttgaaaatgcaggtggc
gaaggtagtgtcgtagtttctaaagttatggaaggcaaaggatcgtttggttacgatgca
aagtctgaaacttatgtagatatgctaaaagcaggtattatcgatcctaaaaaagtaaca
cgtattgccttagaaaatgcggcatcggttgctggaatgattttaactaccgagtgcgct
ttaattgacatcaaagaagatgctccagctatgccaggcggtatgggtggcggtatgcca
ggaatgatgtaa
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