Mariniflexile sp. TRM1-10: CJ739_2203
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Entry
CJ739_2203 CDS
T05592
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
marf
Mariniflexile sp. TRM1-10
Brite
KEGG Orthology (KO) [BR:
marf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marf03032
]
CJ739_2203
03400 DNA repair and recombination proteins [BR:
marf03400
]
CJ739_2203
Enzymes [BR:
marf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CJ739_2203
DNA replication proteins [BR:
marf03032
]
Prokaryotic type
DNA Topoisomerases
CJ739_2203
DNA repair and recombination proteins [BR:
marf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CJ739_2203
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
RP-C
Motif
Other DBs
NCBI-ProteinID:
AXP81284
UniProt:
A0A385BQC1
LinkDB
All DBs
Position
2549995..2552592
Genome browser
AA seq
865 aa
AA seq
DB search
MTAKNRLFYLNRKQIIPKIRQINFFSYTFVATKKSSMAKNLVIVESPAKAKTIEKFLGKD
FKVESSFGHIADLPSKELGVDVEGDFKPKYEVSKDKKEIVKKLKDLAKNADMVWLASDED
REGEAIAWHLAETLKLDKSKTKRIVFHEITKSAIQKAIENPRGIDYDLVDAQQARRVLDR
IVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERERDIQNFTAEASYRIDAEFSNEEGQT
FKAKLPKTFSTKEEAQKFLEKNATATFKVSDLEKKPAKKSPAAPFTTSTLQQEASRKLYF
SVSKTMTMAQRLYEAGLITYMRTDSVNLSDEARNGAKAEIESAFGSKYSKSRNYKGKSKG
AQEAHEAIRPTDFAIHSVDIDRDQARLYDLIWKRAIASQMSEAELERTNVKIAASTHSEH
FTANGEVITFDGFLKVYLESTDDEDVEQEGMLPAMKTNEALINNYITATERYTRPPYRYT
EASLVKQLEELGIGRPSTYAPTISTIQNRNYVEKGTVEGVERSYTQLTLKKGTVKDKVLT
EKVGSDKGKLVPTDIGMIVTDFLVNHFEHILDYNFTAKVEEDFDNIAEGKENWTKMMKTF
YQDFHPQVENVQENADRESGERVLGTDPKTGKQVSVRLGKFGPMVQIGTPDDEEKPQFAS
LSPDQQLNTITYEEAMDLFQLPKNLGTYKGEEVEVNNGRFGPYVKFGDAFVSLPKGVDAL
SVELEDAIALIKEKQAADAPIYMYKKLPVQKGKGRFGPFIKWNNMFINVSSKYDWDNLSD
NDIVELIETKIQKDIDKVIHNWEDEGIRVEKARWGRHNVLKGKIKVELDKSVDVSKMTLE
EAKALIEAKAPKKKAVKKKTATKKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
ttgactgcgaaaaacaggcttttttatttaaacagaaaacagataatccctaaaattagg
cagataaactttttttcatatacatttgtagctacaaaaaaatcaagtatggcgaagaat
ttagtaattgtggagtcacctgcaaaggcaaaaactatcgaaaaatttttaggaaaagat
tttaaggtagagtccagttttgggcatatagccgatttgccttccaaagagttgggggtt
gatgttgaaggtgattttaaaccaaaatatgaagtttcgaaagataaaaaagagatagta
aaaaaattgaaagatctagctaaaaatgccgatatggtttggttagcaagtgatgaggat
cgagaaggagaggctattgcatggcatttggcagagactttaaagttggataaaagcaaa
acaaaacgtattgtttttcatgaaattactaaatcggcgatacaaaaagctattgaaaac
ccaagagggatagattacgatttggttgatgcgcaacaagcacgtcgtgtattggataga
attgtagggtatgagttgtctcccgttctttggcgtaaagttaagggtggtttatcggcg
ggtcgtgtgcaatctgtttctgtgcgattgattgtagagcgtgaacgcgatattcaaaac
tttactgcggaagcatcctataggattgatgccgaattttctaatgaagaaggacaaaca
tttaaagcgaaattgcctaaaaccttttcaacgaaggaagaggcacagaaatttttagaa
aaaaatgcaacggctacatttaaagtttcagatttagagaaaaagcccgctaaaaaatcg
ccggcagcaccgtttacgacatcaactttacaacaagaagcatcacgtaaactttatttt
tcggtaagtaaaaccatgacaatggcacaacgcctatatgaagcgggtttaattacttat
atgagaacggatagtgtgaatctatctgacgaagcacgtaatggtgcaaaagcagaaata
gaaagtgccttcggatcaaagtacagtaagtcaaggaattataaaggaaaatcgaaagga
gcccaagaagcgcatgaggcgatacgtcctaccgatttcgcaattcattcggttgatatt
gatagagaccaagcacgtttgtatgatttaatttggaaacgtgccatagcatcgcagatg
agtgaagcagagttggagcgtaccaatgttaaaattgcagcatccacgcatagcgaacat
tttactgcaaatggagaggttattacttttgacggtttcttaaaggtttatttggaaagc
accgatgatgaagatgttgagcaagaaggcatgcttcctgcaatgaaaaccaatgaagca
ctaatcaataattatattacagcaaccgagcgttatacgcgcccaccatatagatataca
gaggcatccttggttaaacaattggaagaattgggtattggtcgtccgtctacttatgca
ccaacaatttctaccattcaaaatagaaattatgttgaaaaaggtacggttgaaggtgta
gaacgtagttatacccaactcacattaaagaaaggtactgtaaaagataaagtattaact
gaaaaagtaggttcggataaaggaaaattggttccaacagatattggaatgattgtaacc
gactttttagtgaatcattttgaacatattttagattacaattttacggcaaaagttgaa
gaggattttgataacattgccgaaggaaaggaaaattggactaaaatgatgaaaacgttt
tatcaagactttcatccacaagtagaaaatgttcaggaaaacgccgatagggaatctggt
gaacgtgttttaggaaccgatccaaaaacaggtaaacaagtaagtgtgcgtttaggtaaa
tttggacctatggtgcaaattggaactcctgatgatgaggaaaaaccacaattcgcaagt
ttaagtccagatcagcaattaaacaccattacctacgaagaggcgatggacttgtttcag
ttgcctaaaaatcttggtacttataaaggggaggaagttgaggttaataacgggcgtttc
ggaccttatgttaagtttggtgatgcttttgtttctttacctaaaggcgttgatgcttta
agtgttgagttggaagacgctattgctttaattaaagaaaagcaagcagcagatgcaccc
atctacatgtataaaaagttacctgtacaaaaagggaaaggacgttttggaccctttatt
aaatggaacaatatgttcatcaacgtgagtagcaagtacgattgggataatttatcggac
aatgatattgttgagcttattgaaactaaaattcaaaaagacatagataaagttatccat
aattgggaagatgaaggcattcgcgttgaaaaagcccgttggggaaggcataatgtgcta
aaaggaaaaataaaagtggagttagataaatctgttgatgtatcaaaaatgactttagaa
gaagccaaagctttaatagaagctaaagcacctaagaaaaaggcggttaagaaaaaaact
gctacaaagaaaaagtaa
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