Mariniflexile sp. TRM1-10: CJ739_2909
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Entry
CJ739_2909 CDS
T05592
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
marf
Mariniflexile sp. TRM1-10
Pathway
marf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CJ739_2909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marf03400
]
CJ739_2909
Enzymes [BR:
marf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJ739_2909
DNA repair and recombination proteins [BR:
marf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJ739_2909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
nSTAND3
AAA_30
ATPase_2
TrmB
AAA_11
Nrap_D6
T3SS_CopN_3rd
Zot
Motif
Other DBs
NCBI-ProteinID:
AXP81974
UniProt:
A0A385BSD1
LinkDB
All DBs
Position
3398541..3400991
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AA seq
816 aa
AA seq
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MPYFIDIIIPVPLQKLFTYSITSAEANFLKPGMRVSVPFGKSKIYTGIVSTLHNDAPIAY
EAKEIHQILDEGPIVNEKQLQLWQWIANYYMCTLGDVMRAALPSAFVLESETIITKHTKV
IDESILKDDEFLVYEALQHQSSLKIHDIANILDKKNVLPVIKRLIEKEAIAVEEEVYEKY
KPKLVRYVKLHPHFSSETALQKLLDDLSRAPKQHQVILTLFSISATTKKPVKVADLSTES
DASSTTIKALIDKGILEEYFIQTDRVQYSGNDNEDSKSLNEYQETALTEIKESFKEQSVV
LLHGVTSSGKTEVYVKLIEEALDKGQQVLYLLPEIALTAQLITRLQNYFGAQVAVFHSKY
SSQERVEVWNHVLNNSAKAQIVLGARSSIFLPFNNLGLIIVDEEHEQSFKQFDPAPRYHA
RDTAVVLARLHKAKTLLGSATPSLESYFNAKQNKYGFVEITKRFNDVLMPDIELVDIKDK
LKKKRMKGHFSDRLIEEMTETLRGGHQIILFQNRRGFSPIVECHTCGHSPQCPNCDVSLT
YHQYRDQLRCHYCGFVEIMPKTCSACGSPELDNKGFGTEQIEEEVKLLFPDYKVARMDLD
TTRGKYGYEKIITALEQQEIDILVGTQMLTKGLDFRNVKLVGIMNADNMLNFPDFRAHER
SFQLMLQVSGRAGRTEERGKVLIQTYNPLHNILQQVSTNNYIDMYNEQMNDRYNYKYPPV
FKQIKITLKHKDYTRVDTASIWYAKSLRHVFGDFVLGPESPPIARIRNQFHKNILVKIPK
KQSLSKTKEAIIKINNSFLSVKDFRSVKVILNVDNF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgccatattttatagacatcattatacctgtaccacttcaaaaattatttacttatagc
ataacttctgccgaagccaattttttaaagccaggtatgcgtgtatcagttcctttcggg
aaatctaaaatttacacgggtattgtttctacacttcacaacgacgcacctatagcttat
gaagctaaggaaatccatcaaatattggatgaaggtcctattgtaaacgaaaaacagtta
caattatggcaatggatagctaattattacatgtgtactttgggcgatgtgatgcgagct
gctttacccagtgcctttgttttagagagcgaaacgatcataacaaagcataccaaagtt
attgatgaatctattttaaaggatgatgagtttttggtttatgaagcgttgcagcatcaa
tcgtctttaaaaatccacgatatcgctaatattcttgataaaaaaaatgtacttccggtt
attaagcgattgattgaaaaggaagccattgctgttgaagaagaagtgtatgaaaagtac
aagcctaaattggtacgttatgttaagttgcatcctcatttttcttcggaaactgcacta
caaaaactattggatgatttaagtagagcgcccaaacaacaccaggttatattaacgtta
ttttccatttctgcaactacaaaaaagcctgtaaaagttgctgatttgtcaacagaaagt
gatgcgtcttccacaacaataaaagcattaatagataaaggtattcttgaagaatatttt
atacagaccgatagggttcagtattcgggtaatgataatgaagattcaaaaagcctcaat
gaatatcaagaaacagcattaactgaaataaaagaatcatttaaagaacaatccgttgta
ttgcttcatggtgttacatcttcgggaaaaaccgaagtgtacgtaaaacttattgaagag
gctttggataaagggcagcaggttctgtatttattacccgaaattgcattaacagcacaa
ttaatcacgcgtttgcaaaattattttggagcgcaggtggcggtgtttcattctaaatat
tcatcgcaggagcgggttgaggtttggaaccatgttttaaataattccgcgaaagcgcaa
attgttttaggtgcgcgatcatctattttcttgccattcaataatttaggattgataatt
gttgatgaagagcacgagcaatcctttaagcaatttgacccagcaccacgctatcatgcg
cgtgatacggctgttgttttggcacgtttacataaggcaaaaacgcttttagggtctgca
acacccagtttggaaagttatttcaatgcgaagcaaaataaatacggttttgttgaaatc
acaaaacggtttaatgatgtgttaatgccagatattgaattggtggatattaaagataag
ttgaaaaagaaacgcatgaaagggcattttagcgatcgacttattgaagaaatgaccgaa
accttgcgaggaggccatcaaatcatactgtttcaaaaccgacgtgggttttcaccaatt
gtagaatgtcatacttgtggacattcgccacaatgtcctaattgcgatgtgagtttaacc
tatcatcaatatagagaccaattacgctgtcattactgcggatttgtggaaataatgcct
aaaacctgttcagcttgtggaagtcctgaattagacaataaaggttttggaaccgaacaa
attgaggaagaagtgaaacttttgtttcctgattataaagtagccagaatggatttagat
accacacggggtaaatatggctatgagaaaattataaccgctttagagcagcaggaaatt
gatattttggttgggacacagatgcttactaaaggtttggattttagaaacgttaagttg
gtaggtatcatgaatgccgataatatgctaaactttccggattttagagcgcacgaacgc
agttttcaactcatgctgcaggtgtcgggtagggcaggacgtacagaagagcgcggtaag
gtattgattcaaacctataatccgcttcataatattttacagcaggtttctaccaataat
tatattgatatgtataacgaacaaatgaacgatcgttataattacaaatatccgcccgta
tttaagcaaattaaaatcactttaaaacataaggattatactcgggtagataccgcttca
atttggtatgcaaaatcgctacgtcatgtatttggggattttgttttaggacccgaatcg
ccaccaattgccagaattagaaaccaatttcataaaaacattttggtgaagattccgaag
aaacaatcactttcaaaaacaaaagaagctatcattaaaataaataatagcttcttgagt
gtaaaagattttcggtcggttaaagtaattttaaatgtcgataacttctag
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