Mariniflexile sp. TRM1-10: CJ739_2936
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Entry
CJ739_2936 CDS
T05592
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
marf
Mariniflexile sp. TRM1-10
Pathway
marf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJ739_2936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marf03019
]
CJ739_2936
Messenger RNA biogenesis [BR:
marf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CJ739_2936
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
AXP82001
UniProt:
A0A385BS86
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All DBs
Position
3430591..3432165
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AA seq
524 aa
AA seq
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MDNSIILIAGGIILGLVIGFIVAKTLEKNNASKLVKEAKKSAALILKEANSEGESIKKDK
ILQAKEKFLELKAEHEKVILSRDKKMAEAEKRIRDKESQISNELAKTKKLSENLEIKEKD
YDHRLDVLDKKQEEIDRLHKSQVQQLEVISSLSAEEAKSQLVESLKGEAKNDAMAYIQSS
MEEAKLTAEQDAKKIIINTIQRIGTEEAVDNCVSVFNIESDDVKGRIIGREGRNIRAIEA
ATGVEIIVDDTPEAIILSCFDSVRREIARLSLHKLVTDGRIHPARIEEVVEKTKKQIEQE
IIEVGKRTVIDLGIHNLHPELIKMVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNP
KLAKRAGLLHDIGKVPDAETDMETPHAILGMQWAEKFGEKDDVCNAIGAHHDEIEMKSLL
APIIQVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFTGVKKAYAIQAGRELRVIVES
EKVDDQKAADLSFSISQKVQTDMTYPGQVKVTVIRETRAVNIAK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggataactcaattatattgattgctgggggcataatattaggacttgtaataggtttt
attgtagcaaaaaccttagaaaaaaacaatgcttccaaacttgttaaggaagcaaaaaag
agtgcagctttaatacttaaagaagccaatagtgaaggagagtcaattaaaaaagataag
attcttcaagcaaaagaaaaatttttagaacttaaagcagaacacgaaaaagtgattctg
tcgcgcgataaaaaaatggcagaagccgaaaaacgtattcgtgataaagaatctcaaata
tctaacgaactggctaagactaaaaagttaagtgaaaatcttgaaatcaaagaaaaagat
tatgatcacagattagatgtgctcgataaaaaacaagaggaaatagatagattgcacaaa
agccaagtgcaacagctggaagttatttccagtctttctgccgaagaagcgaagtcgcaa
ttagtagagtctttaaaaggagaagctaagaatgatgccatggcgtacattcaaagctcg
atggaagaagctaaattaacggcagaacaagacgctaaaaaaattattataaacaccatt
caacgtataggaacagaagaagcggttgataattgtgtctctgtatttaacatagaatcg
gatgatgttaaaggacgtattattggtcgtgaaggacgaaacattcgtgctattgaagct
gcaacaggggtggagattattgttgatgatactccggaagccattatattatcttgtttc
gattctgtgcgacgtgaaatcgcccgtttatcattgcataaattggtaaccgatggaaga
attcaccctgcaaggatagaagaagtagtagagaaaaccaagaaacaaatagagcaagaa
ataattgaagttggtaaacgtaccgttatagatttagggattcacaatttacatcctgaa
cttattaaaatggtcggtagaatgaaataccgctcgtcttacggacaaaacctattacag
cactcacgcgaagtcgctaaactttgtggtgtgatggctgccgaattaggattaaatcca
aaactagctaaacgggctggtttactacacgatataggtaaagtgccagatgctgaaacc
gatatggaaaccccccacgctattttaggtatgcaatgggctgaaaaatttggtgagaag
gatgatgtatgtaacgctattggtgcgcatcacgacgagattgaaatgaaatcgttattg
gcaccaattattcaagtttgtgatgctatatccggggcacgcccaggagcacgtcgccaa
gttttagacagttatattcaacgtttaaaagatttggaagatatcgctttcggatttact
ggagttaaaaaagcttatgccattcaagcgggtagagagttgcgtgttattgttgaaagc
gaaaaagtagacgaccaaaaagcagccgatttatcatttagtatttctcaaaaagtacaa
actgatatgacctatccaggccaagttaaagtaacagttattagagaaaccagagcggtt
aatattgctaagtaa
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