Mariniflexile sp. TRM1-10: CJ739_3154
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Entry
CJ739_3154 CDS
T05592
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
marf
Mariniflexile sp. TRM1-10
Pathway
marf03030
DNA replication
marf03430
Mismatch repair
marf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJ739_3154
03430 Mismatch repair
CJ739_3154
03440 Homologous recombination
CJ739_3154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marf03032
]
CJ739_3154
03400 DNA repair and recombination proteins [BR:
marf03400
]
CJ739_3154
Enzymes [BR:
marf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJ739_3154
DNA replication proteins [BR:
marf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJ739_3154
DNA repair and recombination proteins [BR:
marf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJ739_3154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DUF7508
GIY_YIG_2
DUF6972
Motif
Other DBs
NCBI-ProteinID:
AXP82216
UniProt:
A0A385BSY2
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All DBs
Position
3774496..3775833
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AA seq
445 aa
AA seq
DB search
MYTIIDIETTGQGNKITEISIFKYDGDKVIDEFTSLVNPQSYIPDYITVLTGIDNFMVAN
APTFSEIADTVLAITEGMVFVAHSVNFDYNVIRNEFKALGIDFTRKKLCTVRLSRKLIPG
HKSYSLGKICRALDIDINGRHRARGDAEATVILFEKLLQTDGSEIVINDFLKKSSKEATL
PPHLPSAVFNAIPNEAGVYYFKNKKGKVIYVGKAKDLKKRVLGHFYNKTERELNLCRETA
DIDFELSGSELIALLMEDAAIKKHFPEYNQAAKRIPKAYAIFMFEDRNGIIHLAYNILKG
APNPLLTFYNITDCRQFLERLCMQFELCPKYCHLQEGVAQCSHYLIKTCKGVCIENESVH
DYNSRVQNAIKHTMEYAKDMVIKEKGRHAEEEAFVMIRNSVYAGYGFIDRSEQIISKEDL
ETYLIPQKDNVDVQKIIRSYMSVGR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccatcattgatattgagactacgggacaagggaataaaatcacggaaatatct
attttcaaatatgatggtgataaagtcatagatgaatttacctctttggtcaatccccaa
agttatatacccgattacataacagtcttaacgggcattgataattttatggttgccaat
gcaccaactttctcagaaatagcagataccgttttagccattacggaggggatggttttt
gttgcccatagtgtcaattttgattacaatgtgatacggaatgagttcaaggcattaggg
attgatttcacaagaaaaaagctttgtacggtgcgactctccagaaaattgattcctggc
cacaagtcttatagcttgggtaaaatttgccgggccttggatattgacatcaacggaagg
catagggctagaggagatgccgaagccaccgtcatcctttttgaaaagttattacaaacc
gatggttctgaaatcgtcattaatgactttcttaaaaaatcgtctaaagaagccacttta
cctccacatttaccaagtgccgtatttaatgcgataccaaacgaagcaggcgtttattat
tttaagaacaaaaaagggaaagtcatttatgtaggcaaagcaaaagatttaaagaaacgg
gtcttgggtcatttttataataaaacggaacgggaacttaacctttgcagggaaacagcc
gatatcgattttgaactatcaggcagtgagcttatcgcacttcttatggaagatgccgcc
ataaaaaagcattttccagagtataaccaagctgccaaaagaatacctaaagcctatgcc
atttttatgtttgaggacagaaacggcatcatccatttggcatacaatatcttaaaagga
gcacccaacccattactgaccttttataacattacggattgcagacaatttttagaacga
ctttgcatgcaatttgaattatgccccaagtattgccatctacaagaaggagttgcccaa
tgttcacattacctcattaaaacctgtaagggcgtttgtattgaaaatgaatctgtccat
gattacaatagccgtgttcaaaacgccataaagcatactatggaatacgccaaagatatg
gttatcaaagaaaaaggccgtcatgccgaagaagaagcctttgtgatgattagaaatagc
gtgtatgcaggctatggctttatagaccgatcggaacaaatcatttcaaaagaggattta
gagacttatttgattccccaaaaggataatgtggatgttcagaagattattagaagttat
atgtctgtggggagataa
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