Mycoplasmopsis arginini: MARG145_0104
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Entry
MARG145_0104 CDS
T04176
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
marg
Mycoplasmopsis arginini
Pathway
marg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
marg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MARG145_0104 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marg03400
]
MARG145_0104 (nfo)
Enzymes [BR:
marg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
MARG145_0104 (nfo)
DNA repair and recombination proteins [BR:
marg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MARG145_0104 (nfo)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF4274
DUF7568
Motif
Other DBs
NCBI-ProteinID:
BAQ54252
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All DBs
Position
complement(93919..94764)
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AA seq
281 aa
AA seq
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MIKLGSHISFAKPDYLLGSARESIENKANCMMIYLGPNQSTYRVDKQYYQLDEYLKLYSS
KIKPEDIVIHAPYIVNPSNPEKSKFAINFLVSDIKRMNYIGAKYLVLHPGSHTIYSQEQA
KESLVSSLKQILAQTKDVVIALETMAGNGTNYCNNFEVLRGVIEEVQSERVAICLDTCHI
WDAGYNIKDYDNFKKYLKDNDFLKYIKVIHLNDSLNPLGARKDRHANIDKGYIGLETLQK
FVFDKDFDNIPIILETPYINNKPPYKEEIALLLNESEPTLF
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgattaaattaggcagtcatatttcctttgcaaaaccggattatttattaggttcagca
agggaatcaattgaaaataaagcaaattgtatgatgatttatttaggtcctaatcaatca
acttaccgcgttgataagcaatattatcaacttgatgaatatcttaagttatattcttct
aaaataaagccagaagatattgtaatacatgccccttatattgttaacccatcaaaccct
gaaaaatcaaagtttgcaattaactttttagtttcagatataaaaagaatgaattatatc
ggggctaagtatttagttcttcaccctggatctcatacaatttattcacaagaacaagct
aaagagagcttggtttcctcattaaaacaaattcttgcgcaaactaaagatgtagtaatt
gctttagaaacaatggcaggaaatggaactaattattgcaataattttgaagttttaaga
ggtgtaattgaagaggttcaatctgaacgtgttgctatctgcttagatacatgccatatt
tgagatgcgggttataatattaaggattatgataattttaaaaaatatttaaaagataac
gattttttaaaatatattaaagttatacatttaaacgattccttaaatccattgggtgct
agaaaagatcgtcatgctaatattgataaaggttacattgggttagaaacattacaaaaa
tttgtgttcgataaggattttgataatataccaattattttagaaacgccatatataaat
aataaacctccatataaagaagaaatagctttattgttaaatgaaagcgaaccaacatta
ttttaa
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