Candidatus Mancarchaeum acidiphilum Mia14: Mia14_0214
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Entry
Mia14_0214 CDS
T05015
Name
(GenBank) ATP dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
marh
Candidatus Mancarchaeum acidiphilum Mia14
Pathway
marh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mia14_0214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marh03019
]
Mia14_0214
03009 Ribosome biogenesis [BR:
marh03009
]
Mia14_0214
Enzymes [BR:
marh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mia14_0214
Messenger RNA biogenesis [BR:
marh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mia14_0214
Ribosome biogenesis [BR:
marh03009
]
Prokaryotic type
rRNA helicases
Mia14_0214
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Flavi_DEAD
ACP_syn_III_C
DUF8638
Motif
Other DBs
NCBI-ProteinID:
ASI13548
UniProt:
A0A218NM58
LinkDB
All DBs
Position
complement(192329..193633)
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AA seq
434 aa
AA seq
DB search
MTLFEELGIEKTLVDKLNAIGIVDATEVQKVSIPIILAGKDVVVRSKTGSGKTYAFVLPI
LNKLSGMDYRNPVAIVLAPTRELAMQTYKAIENLGDRRFKPVVVYGGVSINPQINGIKNG
CNIVIGTPGRLLDIMDRGVLKLDNIKYAVIDEADDMLNMGFIEDVNRILSATKKERQTML
FSATIPRELNSTIHNHTTEPEFISIGGTDGITVKTIDHSFYLTRKNKKFQTLLTYLKENN
PGKTIVFSRTKSGADLVCEALKEAGVNSMLIHGGLTQDRRERVLNNFKVNGEVLVTTDVL
ARGIDIKDIQTIINYDLPEDTDVYVHRVGRSARMGKSGKAFNIVSDSEEELIQEIENKNK
IKMNEIVLHIDKYANLASESIEKAMAKSKRKTGFRSARGSSERPDRYRRNDSRSKPYTNN
NKRHGKSGRYVYGN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaccttatttgaagaattagggatagaaaaaacattggtagataaattaaacgctatt
ggaatagttgatgcaactgaagtacagaaagtatcaatacctattatattggcaggaaaa
gacgttgttgtgcgctctaaaacaggaagcggcaagacttacgcatttgtacttccaatc
ctgaataagctgtcagggatggattataggaaccctgtagcgatagtgcttgcacctacc
agagagctggccatgcaaacttataaggcgatagagaatttgggtgaccgcagatttaaa
cctgtggttgtatatggaggcgtatcaattaacccacagataaacggtataaagaatggc
tgcaacatagttataggcacgccaggaaggcttttggatatcatggataggggagtactc
aaattggacaatatcaagtatgcagtaatagacgaagcagatgatatgcttaatatgggt
ttcatagaagatgtcaataggatactgagcgcaactaaaaaagagaggcagactatgctt
ttttctgccactatacctagagaattaaattctacaatacataaccacacaacagaacct
gaatttatatcaattggaggcactgatgggataacagtaaaaacgatagaccactcattt
tacctcactaggaaaaacaaaaagttccagactctgcttacttaccttaaagaaaacaat
cctggcaaaactatagtgtttagcaggacaaaatcgggagcagatctggtctgtgaagcg
ttgaaggaagcaggagttaactcaatgctcatacatggtggattgacacaggacaggaga
gaaagagtcctgaacaattttaaggtcaatggagaggttttggtaactacagatgtactg
gcaagagggattgatatcaaggacatccagaccataataaactatgatttgccggaggat
actgatgtttatgttcatagagtgggcagatctgccaggatgggaaaaagcggaaaagcc
tttaatatagtcagcgattcagaggaggaattgatccaagagatagagaataagaataaa
ataaaaatgaacgagatcgtacttcatatagacaagtatgccaatctcgcgagtgaatct
atcgaaaaggcgatggccaaatcgaaaaggaagacaggatttagatctgctaggggttca
agtgaaagacctgatagatacagaagaaatgacagcagatcaaaaccttatacgaacaac
aacaagaggcacggaaaaagcggcagatacgtttatggaaattaa
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