Candidatus Mancarchaeum acidiphilum Mia14: Mia14_0534
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Entry
Mia14_0534 CDS
T05015
Name
(GenBank) superfamily I DNA or RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
marh
Candidatus Mancarchaeum acidiphilum Mia14
Pathway
marh03420
Nucleotide excision repair
marh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
marh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mia14_0534
03430 Mismatch repair
Mia14_0534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marh03400
]
Mia14_0534
Enzymes [BR:
marh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mia14_0534
DNA repair and recombination proteins [BR:
marh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mia14_0534
MMR (mismatch excision repair)
Other MMR factors
Mia14_0534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
AAA_30
MRP-S27
Motif
Other DBs
NCBI-ProteinID:
ASI13847
UniProt:
A0A218NN07
LinkDB
All DBs
Position
complement(488204..490903)
Genome browser
AA seq
899 aa
AA seq
DB search
MDNKVSNLNGTIVIASPGTGKTTRLANKVIELLIGGVQSKDILCITFTEKAAAEMQSKIF
KMSKDKGIDQSRIADLKISTFHSYALDYLQEIGNSYQLVSNNIMRYSIYKSFEANKAFNY
SKDHIISTLMPNTENAIRYMKSFGITPEKIDMDKARENIREIYNDSRIQSVTLEEVEKFL
DYFVSAFKDYESSKKEGFIDYNDMLLKFIEHYDRNARHYKWVLVDELQDVNEMEANIAVM
SGDSLFLVGDRKQSIFGFQGGSIGNFNHFSKSGLQLEHLSKNYRSKDRIVEYAKNAFINN
IKSREEVDSYIEELKDFSSSEEGGKVRMVNSQKSFGPAVKVLKELGDELNDTAIITRTNG
QLLAVSRLLDSEGIKYKTTASNSTSEAAKAEIVNYLKGFFYEDTEYIINALNTAFAGLPT
YKAIAISKECSTIKEIKSRAPKFFELRESCSGRIGLNRLFQDVIFPISAQIGMDYFITAR
TVLNSINEFYELIGYNNDPKELFDYISITQEDYQPPTTDEGVTLTTVHKAKGLEFKNVIY
IPKQSERNNLSFIDVVTLAVIKATIGIEVRDELSDEESRVDFVAITRAKDLLYIVADAKF
LNSHKVDGISEEIDIKDDIMPEPEHRKYDEAYSMFVNKDYEGAMKALSYKEPWAYNEVKD
YFSRINAISFSTIDKFDKPADFLKYVILGINYGNVSLSKGLGVHQIAESMFHGNVDEASM
DEEEKPYFDNLKAARAELTKTTGAEQVAAEESIAVPLNSLLSSAPDEMSFHGKIDAVYAD
ENGRYILIDYKTDKTEDYNTAHRKQLEVYRKLYSLKHNVQLDKISSKVMYLGLKGKINTG
KMEYDIVDTGNSKTLLNNFLKKTNDFLECKKDPGKFVDIVKKAAEGESDLLLERIIDSM
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggacaataaagtaagcaatttgaacgggaccattgttatcgcaagcccggggacggga
aagacgacccgccttgcgaataaggttatagagcttctcattggaggagtgcaatcaaag
gatatactctgcatcacatttacagagaaagcggcagccgagatgcagagcaagatattc
aagatgtcaaaggataaggggatagaccaatcaaggattgccgacctgaagatatcgact
ttccacagctatgcactcgattacctgcaggaaatcggcaattcataccagcttgtaagc
aacaacataatgcgctattcaatctacaagagctttgaagccaacaaggcattcaattac
tcaaaggaccacataatatcaacattgatgccgaataccgaaaacgcgataaggtatatg
aaaagctttggtataacgcccgaaaagatagatatggataaggcaagggaaaacataagg
gagatatacaatgattcaagaatacaatccgtaacgttggaggaggttgagaaattcctt
gactactttgtttccgcgttcaaggactacgagagcagcaagaaagagggctttatagat
tacaacgacatgctccttaaattcatagagcattacgacagaaatgcaaggcactacaaa
tgggtgcttgtagacgagctccaggacgtaaacgagatggaggcaaatattgcggtgatg
agcggggattcgctattcctggtaggggacagaaaacaatccatattcgggttccaaggc
ggcagcataggcaatttcaatcatttcagcaaatccggattgcagctagagcacttgagc
aagaactacaggagcaaggacaggatagtcgaatatgcgaaaaatgcatttataaacaat
ataaaaagcagggaggaggttgattcatatattgaggagctcaaggacttctcaagcagt
gaagagggagggaaggtgaggatggtaaattcccaaaagtcattcgggcccgcagtaaaa
gtgcttaaggaattaggggatgaactgaacgataccgcaataataacaaggacaaacggc
cagctcttggccgtttcaaggctgcttgactctgagggaataaagtacaagacaacggca
agcaattccacctcggaagcagccaaggccgagattgtcaattaccttaagggattcttt
tatgaggatacggaatacataatcaatgccctgaataccgcattcgctgggctgccgaca
tacaaggcgatagccatcagcaaagagtgcagcacgataaaggaaatcaagagcagagcc
cctaaatttttcgagcttcgcgaaagctgctccggaaggatcggactgaaccgcttgttc
caagatgtaatattccccatatccgcgcagatcggcatggattactttataaccgcaagg
accgtacttaacagcataaatgagttctacgaattaatcggctataacaacgatccaaaa
gagcttttcgactacatatcgataacccaggaggactatcagcctccaacaaccgatgag
ggggttactctgacaacggtgcacaaggcaaaggggcttgaattcaagaatgtgatatac
atcccaaagcagtcggaaaggaacaatcttagctttatagacgttgtaacattggcggta
ataaaggcaacgataggaattgaggtaagggatgaattaagcgacgaggagtcgagggtt
gacttcgttgcgattaccagggcaaaagaccttctatacatagttgcagatgcaaaattc
ctcaattcgcacaaggtggatggaatatcggaggagatagacataaaggacgacatcatg
ccggagcccgagcacaggaagtacgacgaagcctattcaatgttcgtgaacaaggattat
gaaggcgcaatgaaggccctttcgtataaggagccatgggcgtataacgaggtaaaggac
tatttcagcaggataaacgcgatatcgttctcaactatagataaatttgacaaacctgcg
gatttcctcaaatacgtcatattggggataaactatgggaatgtgtctttaagcaaagga
ttgggagtgcatcagatagcggagagcatgttccacggaaatgtggatgaagcaagcatg
gatgaggaggaaaagccgtacttcgacaacctaaaagccgcaagggccgagctcacgaag
acgaccggggcagagcaggtcgcggcagaagagagtatagcagtgcccctaaattctctc
ttaagcagtgcacccgacgaaatgtcattccatggaaaaatagacgcggtatatgcagat
gaaaacgggagatacatacttatagactacaagacggacaagaccgaggattacaacacc
gcacataggaagcagctggaggtatacagaaagctatactctttgaagcacaacgtacaa
ttggacaagataagctccaaggtgatgtacctgggtctaaaaggaaagataaatacaggc
aaaatggaatacgatatagtcgatacaggcaattccaaaacgctcctgaacaatttcttg
aagaaaacgaacgatttccttgaatgcaagaaggatcccggcaagtttgttgatatagtg
aagaaggcagccgaaggcgaaagcgatctgctgcttgaaagaataatagattcaatgtga
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