Candidatus Mancarchaeum acidiphilum Mia14: Mia14_0634
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Entry
Mia14_0634 CDS
T05015
Name
(GenBank) nucleotide excision repair helicase XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
marh
Candidatus Mancarchaeum acidiphilum Mia14
Pathway
marh03022
Basal transcription factors
marh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
marh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mia14_0634
09124 Replication and repair
03420 Nucleotide excision repair
Mia14_0634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marh03021
]
Mia14_0634
03036 Chromosome and associated proteins [BR:
marh03036
]
Mia14_0634
03400 DNA repair and recombination proteins [BR:
marh03400
]
Mia14_0634
Enzymes [BR:
marh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Mia14_0634
Transcription machinery [BR:
marh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Mia14_0634
Chromosome and associated proteins [BR:
marh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Mia14_0634
DNA repair and recombination proteins [BR:
marh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Mia14_0634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ASI13937
UniProt:
A0A218NN86
LinkDB
All DBs
Position
complement(594431..596287)
Genome browser
AA seq
618 aa
AA seq
DB search
MTEFLFRFDEARGSQKEMMKDIYSSLSDGKDILINAPTGIGKTDASLSAAITYAIKNDKD
ILFLTPKISQHRIAVDVLRGLKQKFNLGISFVDVVGKRNMCINPDVNNIYDSSFYNACEN
LIKKNQCPYFNKLKHFDLDGDYEMLNSFSEGHNAILSQSYKEGLCPYEVSMRFAKKADII
IAGYSHILNPYTKETFLKKLSHDLSDTIIIWDEAHNIFNSAVSYFSTSISENVINRAAAE
LAAITSDIDISFLSFELNKLAAKMLSIEKNEAFVDSSDFLSGEKDMLGDIISDMEKAGMM
YIENKHAKRSSLMHIASFLQGWESSDAATTRIIARGGGRVELKLSNLYPERALSVFKEAY
ANVFMSGTLIPLEMYRDILGVEGADTKSYKSPFSKDKQFVAIDSTVSTKFTGRTTDLYRS
IASKINGIYSSIPGNTSVFFPSFSMLESTYRYLDLGRISEAFIQRKAMSNIEVERLINEF
KASKKGLMLGVMGGSLSEGINYDNNSIKCIVIVGIPLTKPDLELQARINYMNKKFHESGI
EYIYTIPAVIRAIQAAGRAIRSESDKASIIFMDSRYEWKNYKMLIKNFFALYEGKDYLER
MKQFWSSESIEWKSRYDD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgacagaattcttatttaggtttgacgaggcacgaggatcccagaaagagatgatgaaa
gatatatatagttctctttcggacgggaaggacatcctcataaatgcgcctacaggcata
ggaaaaacagatgcctcattaagcgcagctataacctatgcgattaagaatgacaaggac
atactgttcctaaccccaaagatatcacagcataggatagcggtagacgtgctcagaggg
ttgaagcaaaaatttaaccttggaatatcctttgtagatgttgtgggcaaaaggaacatg
tgcatcaaccctgatgtaaacaacatctatgactcatccttctacaatgcctgcgagaac
ctcataaagaagaatcagtgcccttatttcaacaagctgaagcattttgaccttgacgga
gattacgaaatgctaaattcattttctgaagggcataatgcaatattaagccaatcctac
aaagaagggctgtgcccctatgaggtctcaatgaggtttgccaagaaagctgatataata
atagcaggctattcgcatatactaaatccttataccaaggagaccttcctgaaaaagctt
tcccatgatttatctgatactataattatatgggatgaagcgcacaacatattcaattcg
gcggtttcctatttcagcacttcaatatccgagaacgtaataaacagggcggcggcagag
ctagccgcgataacgagcgacatagacattagcttcctaagctttgaattgaacaagctt
gcagctaaaatgctatcaatagaaaagaatgaggcatttgttgattcgtctgatttcctt
tcaggggaaaaggacatgcttggcgatataatctcggatatggaaaaggcaggaatgatg
tatatagagaacaagcatgctaagcgttcatcattaatgcatatagcgtcattcctgcag
ggttgggaatcttctgacgcagccactacaaggataattgcaagaggcggaggcagggtt
gagctgaagctaagcaatctttaccctgaaagggcgctttcggtattcaaggaagcatac
gcaaatgttttcatgagcggcacgcttatacccttggagatgtacagggatatacttgga
gtggagggagcggatacaaaaagctacaaatcaccattctcgaaggacaagcagtttgtt
gctatagactctacggtgtccactaagttcacaggcaggaccacggatctctacaggtca
atcgcatccaagataaatggaatatactcttcaataccaggcaacacatctgtatttttc
ccaagcttcagcatgcttgaaagcacctaccgctaccttgatttaggcaggataagcgag
gccttcatacagcgtaaggcaatgagcaatatagaggttgagaggctgataaacgagttc
aaggcctcaaagaaaggcttgatgctaggagtcatggggggaagcctgagcgagggtata
aactacgacaacaattcaataaaatgcattgttatagttggcatacctttaacaaagccg
gaccttgaactgcaggcaaggataaactatatgaacaagaaattccatgaaagcggaata
gaatatatctatactatccctgctgtcataagagctatacaggctgcaggcagggcgata
aggagcgaaagcgacaaagcctccataatattcatggacagcaggtatgaatggaagaac
tacaagatgctcataaagaacttcttcgcactttacgaaggaaaagactacttggagagg
atgaagcagttctggagctctgaaagcatcgagtggaaatcaagatatgatgactag
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