Marinobacter sp. CP1: ACP86_00640
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Entry
ACP86_00640 CDS
T04052
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mari
Marinobacter sp. CP1
Pathway
mari03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mari00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACP86_00640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mari03019
]
ACP86_00640
Enzymes [BR:
mari01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACP86_00640
Messenger RNA biogenesis [BR:
mari03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACP86_00640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
AKV94799
UniProt:
A0A0K1U5A4
LinkDB
All DBs
Position
complement(131962..133245)
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AA seq
427 aa
AA seq
DB search
MTSDPKHTGDLRFSDLNLDKRLLDAITAIGFEYCTPIQAETLPWTLACEDLIGQAQTGTG
KTAAFLITAIQSLLETPIPEKDRFASEPRVLALAPTRELAMQIAKDAEQLCQHTGHNVVT
VVGGMNYDKQRDQLQNEIVDILVATPGRLIDFLGSQDVFLDQLDILILDEADRMLDMGFI
PDVKRIIRKCTPKEERQTLLFSATFNQDVLNLASMWTSNAEFVEIEPEQKTAERVEQTVY
LVGDDEKLPVLVNFLKRPEVEKALVFANRRDQCRDLEEDLRNQGVKVALMSGEIAQNKRL
KTLDQFKKGSIQVLVATDVAGRGIHVNGVTHVFNYNLPDNAEDYVHRIGRTGRAGKHGVS
ISFAGEDDSFALPAIETYISQKLKTAVPDEALMAPMDNPPITRKRGRRPQGGGGRGQGGR
NQRQRRN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgacccaaaacacaccggcgatctgagattcagcgatctgaacctcgacaaa
cgtttgctggatgccattacggccattggttttgaatactgcacacccattcaggccgaa
acactgccctggacactggcctgcgaagatctgattggtcaggcgcagacgggcaccggc
aaaaccgctgcgtttctgattacggcgatccagagtttgctggaaaccccgattcccgaa
aaggaccgttttgcctccgagccgagggttctggccctggcgccaacccgggaactggcg
atgcagatcgcgaaagacgctgagcaactgtgccagcataccggccacaacgtagtaacc
gttgtcggtggcatgaactatgacaagcagcgcgatcagctgcagaatgagatcgtcgac
attctggttgctaccccgggccgtctgatcgattttctcggatcccaggacgtgtttctg
gaccagctcgacatcctgatccttgatgaggctgatcgcatgctggacatgggcttcatt
cccgatgtgaagcgcattatccgcaaatgcacacccaaagaggagcgccagaccctgctg
ttcagtgccacgttcaaccaggacgtgctgaacctcgcctccatgtggaccagcaacgcg
gagtttgtcgaaattgaaccggagcagaaaacggcggagcgggttgaacagaccgtctac
ctggtgggcgacgatgaaaagctgccggtgctcgtcaatttcctgaagcggccggaagtg
gaaaaggcgctggtatttgccaaccgccgggatcagtgtcgcgacctggaagaagatctg
aggaaccagggcgtcaaagttgccctaatgtcgggcgaaatagcccagaacaagcgcctc
aaaaccctggaccagttcaaaaaaggcagcatccaggtcctggtggccaccgatgtggct
ggccgtggtattcacgtcaacggcgtcactcacgttttcaactacaatctgcctgataat
gccgaagattatgtgcaccggattggccgcacaggcagggctggcaaacacggggtttcc
atcagttttgccggtgaggatgactcgttcgcgcttcccgccatcgaaacctatatcagc
cagaagctgaagactgccgtgcccgatgaggcgctcatggcgccgatggacaatccgcca
attacccgcaagcgcggtcgtcgcccgcagggtggcggtggacgtggtcagggtgggcgc
aatcagcgtcagcgcaggaactga
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