Marinobacter sp. CP1: ACP86_07540
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Entry
ACP86_07540 CDS
T04052
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mari
Marinobacter sp. CP1
Pathway
mari03420
Nucleotide excision repair
mari03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACP86_07540 (uvrD)
03430 Mismatch repair
ACP86_07540 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mari03400
]
ACP86_07540 (uvrD)
Enzymes [BR:
mari01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACP86_07540 (uvrD)
DNA repair and recombination proteins [BR:
mari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACP86_07540 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACP86_07540 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AKV96021
LinkDB
All DBs
Position
complement(1594600..1596765)
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AA seq
721 aa
AA seq
DB search
MDVSHIIDPLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMTVDRVPPTGILAV
TFTNKAAKEMRYRIEQMMDIPARGLWFGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQL
RLIKRVMRENQIDESKWPPKQAQWFISSQKDEGLRADHIQENPGDHFLSIMLKIYRQYEK
LCQQGGLVDFGELLLRSHELWLHRPELLAHYQSRFQHILVDEFQDTNTIQYAWLQVLASN
RVPMTVVGDDDQSIYGWRGAKVENIQQYQRDFPNARLVRLEQNYRSTQMILKAANAVIAN
NQGRLGKELWTDGPEGEPISLYAAFNEQDEANYIADSISAWVQDGNLRSESAILYRSNAQ
SRVLEESLMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVQYRRDDAAFERVVNVPPRGIG
AKSLAELREYATEQSISLWESAERLLDAGQVKGRAKTGLQSFIAIIEGLSEMVGDASLHG
LMKQTIENSGLKDYHASEKGEKGQARVENLEELVNALSDYEVEDGVDALSEFIAQAALDA
GESQAGDHEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHGMSLEEPGRMEEERRLAYVG
ITRAMKKLVLTYAESRRLYGQEKFNALSRFVREIPGDCLQEVRLRNTVTRPAMVERPNQS
MFSQDSAQQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFDEGAKWLVLAYAPLEA
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctcccacatcatcgatccgttgaacgatgcccagcgtgaagctgttaccgct
cagaacgatcaccttttggttctggcaggtgcaggaagtggtaaaacccgtgttctggtg
caccggatcgcctggttgatgaccgtggatcgggtgccgcccactggcatcctggcggtt
acgtttaccaacaaggccgccaaggagatgcgttaccgcattgagcagatgatggacatt
ccggctcgcggcctctggtttggcacctttcatggcatcgcgcaccgtctgttgcgctcg
cactggaaagacgctggcttgccggagaacttccaggttctggacagtgacgaccagctg
cggctgatcaagcgggtgatgcgggaaaaccagattgatgagagcaagtggccgccgaag
caggcccagtggtttatcagtagccagaaggacgaagggctgcgggcggatcatatccag
gagaatccgggcgaccatttcctgtcgatcatgctgaagatctatcgccagtacgaaaaa
ctctgccagcagggtggtctggtggattttggcgagttgttgctgcgatcccatgaactg
tggctgcatcgtccggagctgctggcccattaccagagccggttccagcatatcctggtg
gacgagtttcaggacaccaacaccattcaatacgcctggctgcaggtgctggccagcaat
cgcgtgccaatgacggtggtgggggacgacgatcagtctatctacggctggcggggcgcc
aaggtcgaaaacatccagcagtaccagcgggatttccccaatgcccggttggtgcgtctg
gagcagaattaccgctccacccagatgatcctgaaggcggccaacgcggtgatcgccaac
aaccagggccggctgggcaaggagctctggaccgacggtccggaaggcgaaccgatcagc
ctttacgcggcgttcaacgaacaggacgaagccaactacattgccgacagcatttccgcc
tgggtgcaggacggcaatctgcgcagtgaatccgcgattctctatcgctccaacgcccag
tcccgggtgctggaagaatcgctgatgcgccaggggatcccatatcgggtctatggaggt
ctgcgtttctatgaccgccaggaaatccgaaacgccctggcgtacctgaggctggtccag
tatcgtcgcgacgatgcggcatttgagcgagtggtgaatgtgccgccccgcggcattggc
gcaaagagcctcgcggagcttcgggaatacgccaccgagcaaagcatctccttgtgggaa
tccgccgagcggctgctggacgccgggcaggtgaaaggccgggccaaaaccggcctgcag
tctttcattgccatcatcgaaggcctctccgaaatggtcggcgatgcgtcattgcatggc
ctgatgaagcagaccatcgaaaacagcggcttgaaggattatcacgccagcgaaaaaggc
gagaaaggccaggcccgggtggaaaacctcgaggaactggtgaatgccctgtctgattac
gaagtggaggatggcgtcgacgcgctgtcggaattcattgcccaggcggctctggatgcg
ggtgagtcccaggccggggatcatgaagacagcgttcagctgatgaccctgcactctgcc
aagggcctggagtttcccctggtgttcctggccggcgtggaagaggggctgtttccccac
ggcatgtccctggaagagccgggtcgcatggaggaggagcgccgattggcctacgtgggc
ataacccgggccatgaagaagctggtactcacttacgccgaatcccggcgtttgtacggt
caggaaaagttcaacgcgttgtcccggtttgtgcgggagattccgggcgactgtctgcag
gaagtgcggctgcgcaataccgtcacccgtccggccatggtcgaacgccccaaccaaagc
atgttcagtcaggattcagcacagcaatccgggtttagcctggggcagcgggtgcgccat
cccaagtttggcgagggtatcgtgatgaattcggagggcaccgggcaccatactcgggtg
caggtgaattttgatgagggcgccaagtggctggttctggcgtatgcgcctctagaggcc
tgctaa
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