Marinobacter sp. CP1: ACP86_08480
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Entry
ACP86_08480 CDS
T04052
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mari
Marinobacter sp. CP1
Pathway
mari03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mari00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACP86_08480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mari03019
]
ACP86_08480
Enzymes [BR:
mari01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACP86_08480
Messenger RNA biogenesis [BR:
mari03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACP86_08480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Utp25_C
HEM4
CMS1
AAA_22
HI1480
Motif
Other DBs
NCBI-ProteinID:
AKV96192
UniProt:
A0A0K1U8U6
LinkDB
All DBs
Position
complement(1811935..1813257)
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AA seq
440 aa
AA seq
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MSFSSLGLSEQLVRATSDQGYETPSPIQAQAIPAVLSGRDVMAAAQTGTGKTAGFTLPLL
QRLGENPRTGKGPRALILTPTRELAAQVHDSVNLYSKYVPTKAAVVFGGVKINPQMMKLR
KGLDVLVATPGRLMDLYQQNAVRFNEVEILVLDEADRMLDMGFIRDIRKILSLLPAKRQN
LLFSATFSNEIRTLAEGLLDNPVQVEVAARNTSAENIKQSVYPVDQSQKTALLSKLVRDN
SWDQVLVFTRTKHGANRLTQKLEKDGITAAAIHGNKSQGARTRALADFKAGEVRVLVATD
IAARGLDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADEGKMLAGIERL
IKKQLPRTEVEGFEPTNNLPLKPKAKADPSRARTRSSNGGGNGRPGGKPKSFGDKPGGRS
GGRSQNGGGQRSRSAQRQSA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttcttcactcggtttgtccgagcagctggtccgtgccacgtctgaccagggt
tatgaaaccccgtctcccattcaggcccaggccattcccgccgtgctttctggccgggac
gttatggctgctgcccagaccggtaccggcaaaaccgccggttttaccttgcccttgctg
cagcgtctgggtgaaaacccgcgcaccggcaaaggcccccgcgcgctgatcctgacgccc
acccgtgaactggcggcacaggttcacgacagcgtgaatctttacagcaaatacgttcct
accaaggccgcggtggttttcggtggtgtgaaaatcaatccgcagatgatgaagctgcgc
aaaggcctggacgtgctggtggcaacaccgggccgcctgatggacctgtatcagcagaac
gctgtgcgcttcaacgaagtggaaatcctggtgctggacgaagccgaccgcatgctggat
atgggctttatccgcgacattcgcaagatcctttcgctgttgccggccaagcgccagaac
ctgttgttctccgccaccttctcgaatgagattcgtactctggccgaaggtctgctggat
aacccggttcaggttgaagtggcggctcgaaacacctctgccgaaaacatcaagcagtct
gtctacccggtggatcagagccagaaaaccgccctgctgagcaagctggtgcgtgacaac
agctgggaccaggtgctggtgtttacccgcaccaagcacggtgccaaccgcctgacccag
aaactggagaaggacggtattaccgctgctgccattcacggcaacaagtcgcagggtgcc
cgtacccgcgcgctggcggacttcaaggctggcgaagtgcgtgtgctggtggcaacggat
atcgcggctcgtggcctggacatcaagcagctgccccaggtggtgaactttgaactgccc
aacgtaccggaagactatgtgcatcgtattggccgcaccggccgtgccggtgagagtggt
cacgccctgtcactggtcagtgctgatgaaggaaaaatgctggcgggcatcgaaaggctg
atcaagaagcagctgccgcgcacggaagtggaaggctttgagccgaccaacaacctgccg
ctgaagccgaaagccaaggccgatcccagccgcgcccgtacccgcagtagtaacggtggt
ggtaatggccggcccggaggcaagccgaaaagctttggggacaagccaggtggccgcagt
ggtggccggagccagaatggcggtggtcagcgaagccgctcagcccagcgccagagtgcc
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