Marinobacter sp. CP1: ACP86_09645
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Entry
ACP86_09645 CDS
T04052
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
mari
Marinobacter sp. CP1
Brite
KEGG Orthology (KO) [BR:
mari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mari03019
]
ACP86_09645
Enzymes [BR:
mari01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACP86_09645
Messenger RNA biogenesis [BR:
mari03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACP86_09645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
CON_HrpB
DEAD
ResIII
Flavi_DEAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AKV96391
UniProt:
A0A0K1U9F1
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All DBs
Position
2087039..2089519
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AA seq
826 aa
AA seq
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MLPIDAILPDLKAALERTTTLLLQAPPGAGKTTRVPAALLDAPWRGDGKILMLEPRRLAA
RSAARFMARQLNEQPGQTVGYRTRLDTRVSAATRIEVVTEGILTRLIQADPMLEEYAAVI
FDEFHERSLQADLGLALVRESQQALREDLRLLVMSATLDTGPIAQVLGDVPVITSEGRAF
PVDVHYRPLPRSGRMVDQVTAVVREALADQSGSLLVFLPGVGEIRRVEQQLRANLPDRVM
LAPLYGNLKSEQQDQAISPAPEGQRKVVLATAIAETSLTIEGVRVVIDCGQQRRAVFDPN
SGMTRLVTGRVSRASAEQRKGRAGRMEPGVCYRLWSESEQFGLADYTPPEILEADLAPLV
LELAQWGAREADAVAWIDKPPAAHWRQAVALLRWLDLLDSDGAITDHGKAARELGIHPRL
AHMVLKGRSIGLGGAAAAVAALLEERDLLGPGTGADMHERVRVFFGERRDRTLDVARLKA
VRQSARRLSGPGTTEATPPSETEIGRLLALAYPDRIARRRSDKAARYQLSNGKGAVLRED
DPLARHEWLVAAELDGQAREATIYLAAPVDIPDLELDLADHIQEIEEALWDDSQGKILAR
RARKLGELVLQEKPLGRVDPELVRQGLLSAIRKKGLESLPWSDGSRQWRARMRLLARTFP
DSGWPDTDDAALLDSLEVWLGPFLVGMTRWSDLARIDLLAALNSLIDYPSQQQLQSLAPT
HLTIPTGQRVSLDYTADNGPVLAAKLQALFGWKETPAVAGGRVPVVLHLLSPAQRPLAVT
ADLASFWRNAYPEVRKDMRGRYPKHPWPEDPFTAEAQQGTKKRPTR
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgctccctattgatgccattcttccagacctgaaagcggccctggaacgcacgactacc
ttacttctgcaggctccgcccggtgccggtaaaaccacccgtgtgcctgccgcccttctg
gatgcgccctggcgcggtgacggcaagatcctgatgctggagccccgtcggcttgcagct
cgctctgccgcccggttcatggcccggcaactcaatgaacagcccggacagacggtaggc
tatcgcacaaggctggatacccgtgtgtctgcggccacccggatcgaagtcgtgaccgaa
ggcatcctgacccggctgatccaggcggatccgatgctggaggagtacgcggcggtcatc
tttgatgagttccatgagcgctctttgcaggcggatctgggcctggccctggtgcgggaa
tcgcagcaggcgttgcgggaggatctgcggttgctggtgatgtccgcaaccctggatacc
gggccgattgcgcaagtgcttggagacgttcccgtaataaccagtgaaggacgggcgttt
ccggtcgatgttcattaccggccgttgccgcgcagtggccgcatggtggatcaggttacc
gctgtggttcgggaggcattggctgatcaaagcggctcactgctggtgtttctgcccggt
gtgggtgagatacgtcgggttgagcaacagctccgtgcaaacctgccggaccgggtgatg
cttgctccactatacggcaatctgaaatcggagcagcaggaccaggcaatctcgccggct
cccgaaggccagcgcaaggtggtgttggctacggctattgccgaaaccagtctgaccatt
gaaggggttcgggttgttatcgattgcggtcagcagcgtcgggccgtttttgatcccaac
agtggcatgacccgcctggtcactggccgggtatccagggcttctgcggaacagcgtaaa
ggccgggccggccggatggagcccggggtctgttatcgattgtggagcgaatcggaacag
ttcggattggccgattacacgccgcccgaaattctggaggccgatctggcacccttggtg
ctggaattagcccagtggggcgcgcgggaagccgatgccgtcgcctggattgataagccc
cctgccgcccattggaggcaggctgtggccctcctgcggtggctcgatctgctcgattca
gacggagctattacggaccacggcaaagcggcccgggagctgggtatacacccgcgactg
gcgcatatggtgctgaaaggccgttctatagggctcggaggcgcggctgcggccgtggcc
gccttgctggaagagcgtgatctcctgggccccggaactggtgcggacatgcacgagcgg
gttcgggtgttcttcggggaacggcgggatcgcacgctggatgtcgctcgcctgaaggct
gtacgccagtcggcccggcgtctttccgggcccgggacgactgaggcaacaccgccctcg
gagaccgaaatcggccgattgcttgccctggcctatccggaccgtattgccaggcggcga
tcggataaggcggcgaggtatcagctcagtaatggcaaaggtgcggtactgagagaggat
gatcccctggcacggcacgagtggctggtggcggccgagctggatggccaggcccgcgaa
gccacgatttacctggccgcgccggtggacattccggacctggagctcgacctggctgac
cacatacaggagatcgaagaggcactgtgggacgacagccagggtaaaattctggcgcgg
cgtgcgcgaaaactgggtgaactcgtgcttcaggaaaagccgctcggccgggtggatccg
gaactggtccggcaggggctgctcagcgcgattcggaagaagggcctggaaagcctgccc
tggagtgatggcagtcgccagtggcgtgcccgaatgaggttgctcgccagaaccttcccg
gattccggctggccggacaccgatgacgcggcgttactggatagtctcgaggtttggctg
ggcccgtttctggtcggcatgacccgatggtccgatctggcccggatcgacttgctggcg
gcccttaacagcctgattgattacccgtcccagcagcagcttcagagtctggcgccaaca
catctgaccataccgaccggccagcgggtgagtctggattacaccgccgacaatggcccg
gtgttggcggccaagctccaggcgctgtttggctggaaagaaacccctgccgttgccggt
gggcgggtaccggtggtgcttcatctgttgtcccccgcgcaacggcctctggcggtcacc
gccgatctggccagtttctggcgtaacgcctaccccgaggtgcgcaaggatatgcgtggg
cggtatcccaagcatccctggccggaagatccgtttaccgccgaggctcagcagggcacg
aaaaaacgcccaactcgctga
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