Marinobacter sp. CP1: ACP86_14950
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Entry
ACP86_14950 CDS
T04052
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mari
Marinobacter sp. CP1
Pathway
mari03410
Base excision repair
mari03430
Mismatch repair
mari03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACP86_14950
03430 Mismatch repair
ACP86_14950
03440 Homologous recombination
ACP86_14950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mari03400
]
ACP86_14950
DNA repair and recombination proteins [BR:
mari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACP86_14950
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACP86_14950
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACP86_14950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
SIS_2
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AKV97345
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Position
3240593..3242326
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AA seq
577 aa
AA seq
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MTPKKILRRPQPDTFPDWGQNLPPLLRRLYAARGVTSDEQLSYTLKHLASPLSLRGIDRA
VELLAEAIDQQQRVLVLGDFDADGATSTAVAMLGLSMLGLQSIDFRVPSRFADGYGLTPG
IIERLRDEGQLPDLMVTVDNGISAVEGVRAAKELGVKVVVTDHHLAGEELPDADAIVNPN
QPGCPFLSKNAAGVGVMFYVLTALRKQLRETNRLPNPEPNLGCLLDLVALGTVADVVPLD
HNNRIFVEQGLRRIRQGEARPGILALLEVAGRDHTAISSTDLGFVVGPRLNAAGRLDDMS
IGIACLLADSPDEARRLARELDTFNRERRTIEKDMKAQAQDLLSSMSLDLDGLPWGLALF
DTDWHQGVIGILAARIREQTHRPTIAFAPDENGEDIKGSARSIPGLHIRDVLAVVDSRHP
GIMKKFGGHAMAAGMTLARDDLDAFSEAFDRAVRDTLSAEDLEAAITTDGPLGASELSLD
TAALLKRAGPWGQHFPEPLFDGEFRVVSQRIVGENHLKLVLQPVEGGGIIDGIAFNTGPE
VPDYTRTGARVVYKPDANTFRGRTNLQLLVDYLEPLA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgacaccaaaaaagatcctgcgtcgcccccagcccgatacctttccggattgggggcaa
aacctgcctcccttgcttcgccgcctctacgctgcccgtggcgttacctctgatgagcag
ctgagctacaccctgaaacacctggcttcacccctgtctctgaggggtattgaccgggcc
gttgagcttcttgccgaggctatcgatcagcaacagcgggtgcttgtgctcggcgatttc
gacgccgatggtgctaccagtacagccgttgccatgcttggactctccatgctgggtctg
cagagtatcgactttcgcgtgcccagccggtttgcagatggctacggcctgacgccgggt
attattgaacgcctgcgcgacgagggtcagctcccggacctgatggtcaccgttgataac
ggcatatccgcggttgaaggtgttcgagcggccaaggaacttggcgtgaaagtggtggtg
accgatcaccacctggccggcgaagagcttccggatgccgatgccatcgtcaatccaaac
caaccgggttgtcctttcctgagcaagaacgcggccggtgttggcgtgatgttttacgtg
ctcacagcgttgcgtaagcagcttcgggaaaccaatcgcctgcccaatcccgagcctaac
ctggggtgcctgctggacctcgtggcgctcggtaccgtggctgatgttgtgcctctggac
cacaacaaccggatcttcgtggagcagggcctgcgccgtatacgccagggtgaggcccgt
cccggtatcctggcgctgctggaagtcgctggccgggaccacacggcgatcagctcaacc
gaccttggatttgtggtcgggccccgcctgaatgccgccgggcgactggatgacatgagc
atcggcattgcctgcctgctggccgacagtcctgatgaagcgcggcgcctggcccgggag
ttggacaccttcaaccgggaacgtcgcaccatagaaaaagacatgaaagcccaggcccag
gatctgctgtcttcaatgtcgctggacctggatggactgccctgggggcttgcgcttttc
gataccgattggcaccagggcgttatcggaattctggctgcccgtatccgtgagcagacc
catagaccgaccattgccttcgcgccggacgaaaacggcgaagacatcaaaggttctgct
cgctccattcccgggcttcatatccgggatgtgcttgccgtggtcgactcacgtcatccg
gggatcatgaaaaaatttggcggtcacgcgatggctgcgggcatgaccctcgccagggat
gatctggatgccttttccgaggccttcgatcgcgccgttcgagacaccctctcggccgag
gatctggaggcggcgatcacaaccgatgggcctctgggcgcaagtgaactgtcgttggac
accgccgcactgctcaaacgcgccggcccctgggggcagcattttccggagccactgttc
gacggcgagttccgggtggtcagccagcggatagtcggcgaaaaccatctgaaattggtg
ttgcaacctgtcgaaggcggcgggatcatcgacggcattgccttcaataccgggccggaa
gtccctgattacacgcgcaccggtgctcgggtggtttacaagccggatgccaataccttc
cgggggcgcaccaatctccagcttctggtggattacctcgagcctcttgcctga
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