Marinobacter sp. CP1: ACP86_17355
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Entry
ACP86_17355 CDS
T04052
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mari
Marinobacter sp. CP1
Pathway
mari03030
DNA replication
mari03430
Mismatch repair
mari03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACP86_17355
03430 Mismatch repair
ACP86_17355
03440 Homologous recombination
ACP86_17355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mari03032
]
ACP86_17355
03400 DNA repair and recombination proteins [BR:
mari03400
]
ACP86_17355
Enzymes [BR:
mari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACP86_17355
DNA replication proteins [BR:
mari03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACP86_17355
DNA repair and recombination proteins [BR:
mari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACP86_17355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AKV97770
LinkDB
All DBs
Position
3774429..3777911
Genome browser
AA seq
1160 aa
AA seq
DB search
MSQTFVHLRVHSEYSMVDGLVRVKPLIKRVAELGMPAVGLTEQSNMCSLVRFYKAAMGAG
VKPIIGADLWLENPDEPENPFRITLLARDNDGYLNLTEIISLGYTEGQRFGKPIIQRKWL
EARPNGLIALSGSRMGDVGKALMAGKTELARERARYWMDLYPDSYYLELQRTGRPGDEDC
LHLSVELAGALGLPVVATNDVHFLEAEDFEAHEARVCIGESRTLDDPRRDRRFSDQQYLR
SADEMIELFSDIPEAIENTVEIARRCSVKVRMGEYFLPNYPIPDGMTMDDYFRKVSEEGL
EERLAKTLSKDDPEYDAKREAYYKRLNFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYAQLITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIEYTA
QKYGREAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPFEPGMTLEKALEQEP
QLVEFLENDEEAQEIWEMALKLEGVCRNAGKHAGGVVIAPTKITDFSPLYCDDEGGSLVT
QFDKGDVEDAGLVKFDFLGLRTLTIIKWALNMINPRREKKGMQPLDINEIPLDDVPSFDM
LKKAETTAVFQLESRGMKDLIRRLQPDSLEDMIALVALFRPGPLQSGMVDDFIDRKHGRQ
PMSFPHPDYQYEGLKPVLEPTYGVILYQEQVMQIAQVMAGYTLGNADMLRRAMGKKKPEE
MAKQKQFFLDGCEQNGINTTLAENIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYP
AEFMAAVLTADMQNTDKVVTLVEECRNMKLDLLVPDVSRSEYTFTVNDEGQIVYGLGAIK
GLGEGPIQSIVEGRGDGEPYQDIFDFCRRIDLKKVNKRAMEALIRCGAMDKLGASRAQLM
ASIDKAVQQAGQQSRNESVGMMDMFGEMLEAGDGGDPYEDVAGMREWPEKQRLKGEKDTL
GLYLTGHPFDEYEKEVRRFVRSSIADLKPNKSPQRVAGLVVAQRTMKTRTGSTMCFITLD
DRSARIEATLFSEAFFENRELLQSDQVIVVEGQVSHDDYSGQMKMRVSSVMDVASARQQF
SRGLKLNLHADQLQNGLLEKLDTTLRPFRCDGSPVWIEYSSPEASTRIELGESWRVQPDD
NLLLELRYLVGDQSVELVYD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagacttttgtacacctccgcgtccattccgaatactccatggtggatggcctg
gtcagggttaaaccgctgataaagcgcgttgccgagctgggcatgccggctgttggcctt
accgagcaatccaacatgtgctcgctggttcgcttttacaaggcggccatgggcgcgggc
gtcaaacccatcattggcgccgatctgtggctggaaaatcccgacgagcccgagaatccg
ttccgcatcacgctgttggcgcgagataacgacggttatctcaacctcaccgaaatcatt
tccctggggtataccgaggggcagcggtttggcaagccgatcatccagcgcaaatggctt
gaggctcggccgaacggtttgattgcgctctctggttcgagaatgggcgatgtgggcaag
gctttgatggcgggcaaaacggaattggcccgcgagcgcgcccgttactggatggatttg
tacccggatagctactacctcgagttacagcgcaccggtcgtccaggagacgaagactgc
ctgcacctgagtgttgagctggccggtgctcttggccttccggtggttgccactaacgat
gtgcacttcctggaggcggaagactttgaggctcacgaggccagggtctgtatcggtgag
agtcgtaccctggatgatccgcgccgtgatcgccgcttcagtgaccagcagtacctgcgc
agcgccgatgagatgatcgagctgttcagcgacattccagaagcaatcgagaacaccgtg
gagattgcccggcgctgctcggtgaaggttcggatgggtgagtatttcctgcccaattac
ccgattcccgatggcatgaccatggacgactatttccggaaggtctccgaggaggggctg
gaagagcggctggccaagaccctcagcaaggacgatccggaatacgatgccaaacgcgag
gcctactacaagcgcctgaacttcgagctggatatcatcatccagatggggttcccgggc
tacttcctgatcgtgatggacttcatcaagtgggccaagaacaacggtgtgcccgtgggg
ccaggccggggttccggtgccggctcgctggtggcctacgcccagctgattactgacctg
gatccactagagtatgacttgctgttcgagcggttcctgaacccggaacgggtttccatg
cccgactttgacgtcgacttctgcatggagggccgggaccgggtgatcgaatacaccgcc
cagaaatacggacgagaggcggtgtcgcagattattaccttcggcaccatggccgcgaag
gcggttgtgcgggatgttgcccgggtccagggcaaatcctacggcttggccgacaagctg
tctaaaatgattccgttcgagccgggcatgacccttgagaaggctctggagcaggagcca
cagctggtcgagtttcttgagaacgacgaggaagcccaggaaatctgggaaatggccctg
aagctcgagggggtgtgcaggaacgccggtaaacacgccggcggcgtggtgatcgcgccc
accaagatcaccgatttttcgcccctgtactgcgacgacgagggcggaagcctggtgacc
cagttcgacaagggcgacgtggaagacgccgggctggtgaagttcgacttcctgggcctg
cggacgctcacgatcatcaagtgggcgctgaacatgatcaatccacgccgggaaaagaag
ggcatgcagccgctcgacatcaacgagattccgctggatgacgtgccctcgttcgacatg
ctcaagaaagcggaaaccacggcggtgtttcagctggaatcccggggcatgaaggacctg
attcgccgtctgcagccagactcactggaagacatgatcgccctcgtggccctgttccgg
ccggggccgctgcaatcgggcatggtggacgactttatcgaccgtaagcacggccgccaa
cccatgtccttcccgcatccggattaccagtatgaaggcctgaagccggttctggagccc
acctacggggttatcctgtaccaggagcaggtcatgcagatcgcccaggtgatggccggt
tatacccttggtaatgcggacatgctgcggcgcgccatgggtaagaaaaagcccgaggaa
atggccaagcagaagcagtttttcctggatggctgtgagcagaacgggatcaacacgacc
ctggccgaaaacatctttgacctggtagagaagtttgccggctacggcttcaacaaatcc
cactccgccgcctatgcactggtgtcctaccagacactctggctgaaagcccattacccg
gcagaattcatggccgcggtactgactgccgatatgcagaacaccgacaaggtggtcacg
ctggtagaagagtgccggaacatgaaactggatcttctggtgccagacgtcagccgttcg
gaatacacctttaccgtcaacgacgaaggccagattgtgtatggcctcggtgctatcaaa
ggcctgggcgagggcccgattcagagcatcgtggaaggtcgtggcgatggcgagccctat
caggatattttcgatttttgccgacgcattgacctgaaaaaggtcaacaagcgcgccatg
gaagcgctgatccggtgcggcgccatggacaagcttggcgccagccgggctcagttgatg
gccagcatcgataaggccgtgcagcaggccggccagcaatcccgtaacgagtccgtcggc
atgatggatatgttcggcgaaatgctcgaggccggtgatggtggcgatccctacgaggac
gtggccggcatgcgcgagtggcccgaaaaacagcggctgaaaggggagaaagataccctg
gggctttacctcaccggccacccgtttgatgaatacgagaaagaggttcggcggtttgtc
cggtcctccatcgccgatctgaagccgaacaagtcaccccagcgcgtcgccgggttggtg
gttgcccagcgcaccatgaaaacccgcaccggttccaccatgtgtttcattacgctggat
gacaggagcgcgcggatagaggcgaccctgttctcggaagccttctttgaaaatcgggag
ctgttgcaatctgaccaggtgattgtggtggaaggtcaggtgagccacgacgactattcc
ggccagatgaagatgcgggtgagctcggtgatggatgtcgcgagcgctcgtcagcagttt
agccgtgggttgaagctcaacctgcacgccgatcagctgcagaacggactgctggagaaa
ctggacaccaccctgaggccgttccgctgtgatggcagtccggtctggattgagtacagc
agccccgaggcgtccacccggatcgagctgggtgaatcctggcgggtgcagccggatgac
aacctgctactggagctccgttacctcgtaggcgaccagtcggtagaactggtctatgat
tga
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