Marinobacter sp. CP1: ACP86_17845
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Entry
ACP86_17845 CDS
T04052
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
mari
Marinobacter sp. CP1
Brite
KEGG Orthology (KO) [BR:
mari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mari03032
]
ACP86_17845
03036 Chromosome and associated proteins [BR:
mari03036
]
ACP86_17845
03400 DNA repair and recombination proteins [BR:
mari03400
]
ACP86_17845
DNA replication proteins [BR:
mari03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ACP86_17845
Chromosome and associated proteins [BR:
mari03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ACP86_17845
DNA repair and recombination proteins [BR:
mari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ACP86_17845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HTH_40
Plk4_PB1
HU-CCDC81_bac_1
DUF5666
Herpes_UL6
Motif
Other DBs
NCBI-ProteinID:
AKV97858
LinkDB
All DBs
Position
3884309..3884605
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AA seq
98 aa
AA seq
DB search
MTKSELVELIASKQTQLSVKDVELAVKTIIEHMSQSLADGQRIEIRGFGSFSLHHRAART
GRNPKTGEAVQLPAKYVPHFKPGKELREQVNDSLKKGF
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtccgaactggtcgagctgattgcttccaagcaaactcagctctccgttaaa
gatgtcgaactggctgtaaaaaccatcatcgagcacatgtcccagtcgcttgccgatggt
cagagaatagaaatccggggatttggcagtttttcccttcatcaccgggccgcgcgtacc
gggcgcaatccgaaaaccggtgaggctgttcagttgccagccaaatatgtgccgcacttc
aaacccggcaaggaattgagagagcaggtcaacgacagcttgaagaaaggcttttaa
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