Marinobacter sp. CP1: ACP86_17875
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Entry
ACP86_17875 CDS
T04052
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mari
Marinobacter sp. CP1
Pathway
mari03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACP86_17875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mari03400
]
ACP86_17875
DNA repair and recombination proteins [BR:
mari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACP86_17875
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACP86_17875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
Kinesin
AAA_30
TrwB_AAD_bind
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AKV97863
LinkDB
All DBs
Position
3888892..3890952
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AA seq
686 aa
AA seq
DB search
MASNQANVSAREGVFQVDSPFQPAGDQPKAIEGLVDGIQSGLAHQTLLGVTGSGKTFTIA
NVIQQVQRPTIIMAHNKTLAAQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIE
KDASINEHIEQMRLSATKALLERPDAIIVATVSSIYGLGDPQSYLKMMLHLDRGDQIDQR
YILRRLAELQYTRNDIEFHRANYRVRGDVIDVFPAESEKEAIRIELFDDEVENLSYFDPL
TGEVLRRVPRVTIYPKSHYVTPRQTVLDAVEHIKVELDERLQQLRDNNRLVEAQRLEERT
RYDIEMMLELGYCNGIENYSRYLSGRRPGEAPPTLFDYLPPNALLVVDESHVTIPQIGAM
YKGDRSRKETLVEYGFRLPSALDNRPMKFEEWERIAPQMIFVSATPSTYEAEHAGQVVEQ
VVRPTGLLDPEIEVRPASTQVDDLLSEIHTRVKVKERVLVTTLTKRMAEDLTDFLMEHDI
KVRYLHSDIDTVERVEIIRDLRRGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRS
ERSLIQTMGRAARNVHGKAILYGDRITGSMQRAIDETERRRAKQEAHNLEQGITPQGLNK
KIADIMEGAGGGGRGRRKAERPGQKAAEEAEQYRAKAGNRSPEEVLKEVSRLEDEMYKAA
SELDFETAARLRDDIAELKEAALRTG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaatcaggcaaacgtttccgccagagagggtgtgttccaggttgattcgccg
ttccagccagcgggcgatcagcccaaggcaatcgaagggctggtggatggtatccaatcc
ggtctggcacaccagacgttgctgggggtaaccggctccggtaaaaccttcaccatcgcc
aatgtcatccagcaggtccagcggcccaccatcatcatggcccataacaagaccctggcc
gcccagctctatggtgagttcaaggagttctttcccgacaatgcggtggagtatttcgtt
tcctactacgactactatcagccagaagcttacgtgccctcgtcggacacgtttatcgag
aaagacgcttctatcaacgagcacattgagcagatgcgtctatctgctaccaaggcattg
ctggaaagaccggatgccatcattgtggcgacggtgtcgtctatctacggcctcggtgac
ccccagtcctacctgaagatgatgctgcatctggaccggggcgatcagatcgatcagcga
tacatcctccggcgcctggccgaacttcagtacaccaggaacgatatcgagttccaccgg
gccaattatcgggttcggggcgatgtgatcgatgtattcccggcggaatccgagaaggaa
gctatccgcatcgagctcttcgatgacgaggttgagaatctcagctatttcgacccgttg
accggtgaggtcctgcgccgagtgccacgggtcaccatctacccgaaatcgcactatgtg
acgccccggcagacggtgttggatgcggtcgagcatatcaaggttgagctggatgagcgg
ctgcagcagctgcgggacaacaaccgcctggtggaagcacaacgcctggaagagcgcacc
cggtacgacatcgaaatgatgctggaactgggctattgcaacggcatcgagaactactcg
cgctatctctcgggtcgccgcccaggtgaggcaccgccgacactgtttgattacctgccg
cccaatgccttgctggtggtggatgaatctcacgtgaccattccccagatcggcgccatg
tacaagggcgaccggtcccggaaggaaacccttgttgagtacggtttccgcctcccatcg
gcgctggataaccgacccatgaagtttgaagagtgggagcgaattgcgccccagatgatc
ttcgtatccgcaaccccgtccacttacgaggccgagcatgcgggtcaggtggtggaacag
gtggtgcgccccaccggcctgctggacccggaaatcgaggtgcgtcccgcgtctacccag
gtggacgatctgctctcggaaatccacacgcgggtgaaggtaaaggaacgggttctggtg
accacgctgaccaagcgtatggccgaggatctgaccgacttcctgatggaacacgacatc
aaggttcgctatctgcactcggacatcgataccgtcgagcgggtggagatcatccgggac
ctccggcggggggaattcgatgtgctggtgggcatcaacctgctgcgggaaggtctggac
atgcccgaggtttcgctggtggccatcctggatgcagataaggaaggtttcctgcgctcc
gagcgctcactgatccagaccatgggtcgtgcggcgcggaatgttcacggcaaggccatt
ctctacggtgaccggattacaggctccatgcagcgggctattgatgagacagagcgtcgc
cgggccaagcaggaagctcacaatctggagcagggcattaccccgcagggcctgaacaag
aaaattgccgacatcatggaaggtgccggaggcggcggccgtggccgtcgcaaggccgag
cgcccggggcagaaagcagccgaagaggcggaacagtatcgggccaaggctggcaatcga
tcgccggaggaggtcctcaaggaggtgtcccggcttgaggatgaaatgtacaaggccgct
tccgaactggatttcgagacggctgcgcgtctgcgggatgatatcgccgagctgaaagag
gcggcactgcggaccggctga
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