Marinobacter sp. CP1: ACP86_18025
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Entry
ACP86_18025 CDS
T04052
Name
(GenBank) protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
mari
Marinobacter sp. CP1
Brite
KEGG Orthology (KO) [BR:
mari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mari03009
]
ACP86_18025
Ribosome biogenesis [BR:
mari03009
]
Prokaryotic type
ribosomal protein modification factors
ACP86_18025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
AKV97892
LinkDB
All DBs
Position
complement(3925186..3927378)
Genome browser
AA seq
730 aa
AA seq
DB search
MEINVNFLENLRLEAKFDDFTVVTDQPIRYKGDGSAPSPFDYFLASSALCAAYFVRVYCL
ARDIPTENIRLSQNNIVDPENRYNQIFKISVELPEDISEKDRQGILRSIDRCTVKKVVQT
GPTFEIETVENLDADAQALLMTQPEGGTQTFIEGKDLPLEQTIANMTGILEELGMKIEIA
SWRNIVPHVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLSCNFFYNDQFFGED
IANSDFVHYPNEKWFKPGPNDELPEGILDDHCLAIYNPDGELGGSNLIDTNSGRADRGIV
SLPYVRKSDGEVVYFPSNLIENLFLSNGMSAGNTLNEAQVQCLSEIFERAVKKQIIEEEI
ALPDVPREVLEKYPNILEGIEALEAQGFPTLVKDASLGGQFPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPAPTFNSLAVTEPNNFVEHFIDSTGVVSWRF
FSARSDYDFVEWDFSGTNAEEAECLFGILEELGKQVYVAVYEELGAPVCRILVPGYSEVY
PVEDLIMDNTNMALDYREDILNLHRLDDEQLADLVERLEASQLDNYMTIITLIGVEFDEN
TIWGQLTILELKILICLALQWHEEALEFVDMFLQFNDNTVERGLFYRAMYAVLEVTLDDE
MELDDYITNFTRMFGEETMEAVVGSVDGSVRFHGLEATNMQLDGLEKHQRLIESYRKLHA
ARAARAGLQP
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaacgtcaactttctcgagaacctcagacttgaagccaagtttgacgatttc
accgtcgtaacggaccagccgattcgctataagggcgacggctcggcgcccagcccgttc
gactacttcctggcctcctctgccctgtgtgcagcctactttgtccgggtctactgcctg
gcccgggacattcccaccgagaatatccgcctgtcccagaacaacatcgtggacccggaa
aaccgctacaaccagatcttcaagatctccgtggaactgcccgaggacatttcggagaaa
gaccgccagggcatcctgcgctcgatcgaccgctgcaccgtgaaaaaagtggtccagacc
ggcccgaccttcgagattgaaaccgtcgaaaacctggacgcggacgcccaggcactgctg
atgacccagccggaaggcggcacccagacctttatcgaaggcaaggacctgccccttgaa
cagaccattgccaacatgactggcattctcgaagagctgggcatgaagatcgagattgcc
tcctggcgcaacattgtgcctcacgtgtggtccctgcacattcgcgatgccgcctcaccc
atgtgcttcaccaatggcaagggtgccaccaaggaaagcgccctttgctctgccctgggc
gaattcatcgagcggctcagctgcaactttttctacaacgatcagttctttggtgaggac
atcgccaacagcgacttcgtccactacccgaacgaaaagtggttcaagccgggccccaac
gacgagctgccggaaggcattctggatgaccactgcctcgccatctacaacccggacggc
gagcttggcggctccaatctgattgataccaactccggcagagccgaccggggcattgtc
tccctgccctacgtgcgaaaatcggatggcgaggtggtgtatttcccctccaacctgatt
gagaacctgtttctcagcaacggcatgagtgcgggcaataccctgaacgaagcacaggtt
cagtgtctgtcggagattttcgaacgggcggtaaagaagcagattatcgaagaggagatt
gcacttccggacgtgccccgggaggtactggaaaaatacccgaacatcctggaaggcatt
gaagccctggaagcccagggtttcccgactctggtaaaggacgcctccctcggcggccag
ttcccggtaatgtgcgttaccctgatgaacccgcgaacgggcggcgtgttcgcctctttc
ggcgctcacccgagctttgaagtggcccttgagcgaagcctgacggaactcctgcagggc
cgcagcttcgagggcctcaatgatgtgccggcgcccaccttcaacagcctggcagtgacc
gagccaaacaactttgtggagcacttcatcgactctaccggcgttgtttcctggcggttt
ttcagcgccaggtccgattatgatttcgttgaatgggatttttccggcaccaacgccgag
gaagccgagtgtctgttcggtatcctcgaggaactgggcaagcaagtgtatgtcgccgtt
tacgaggaactgggcgcgccggtctgccgaatcctggttccaggctattccgaggtgtat
ccggtggaagacctgatcatggacaacaccaacatggctttggactatcgggaagacatc
ctcaacctgcaccgcctggacgatgagcaactggccgatctggtggaacgcctggaagcc
agccagctggacaactacatgacgatcatcaccctgatcggcgtggagttcgatgaaaac
accatctggggccaactcacgatccttgagttgaagatcctgatctgccttgccctgcag
tggcatgaagaagccctggaattcgtcgacatgttccttcagttcaacgacaacaccgtt
gagcgcggtctgttctaccgagccatgtatgcggttctcgaagtcacccttgacgacgaa
atggagctggacgactacatcaccaacttcacccgcatgttcggcgaggaaaccatggaa
gctgttgttggctcagtggatggcagcgttcgtttccacggcctggaagccacgaacatg
caactggatgggctggagaagcatcagcggttgatcgagagctaccggaagctgcacgcg
gcgcgtgcagccagggcgggcctgcagccgtaa
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