Marinobacter sp. JH2: MARI_00610
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Entry
MARI_00610 CDS
T06162
Symbol
phrB_1
Name
(GenBank) (6-4) photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
marj
Marinobacter sp. JH2
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marj03400
]
MARI_00610 (phrB_1)
Enzymes [BR:
marj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
MARI_00610 (phrB_1)
DNA repair and recombination proteins [BR:
marj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
MARI_00610 (phrB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QBM15981
LinkDB
All DBs
Position
complement(56042..57574)
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AA seq
510 aa
AA seq
DB search
MANLILILGDQLSTTLSALEEADKDNDLIVMAEVHDEASYTNHHKKKLVLVFSAMRHFAQ
ELEQHGWRVQYQRYTLDTPALSLEQYITTVVQQHQPERLVTTECGEWRLHTQISQWHKSL
GIPVEIRPDTRFICSHKEFAEWADGKKQLRMEFFYREMRKKTGLLMTPDGQPEGGHWNYD
ADNRKKWTGKPPAPRPFRAEPDDITREVIKQVDEQFSEHFGTTDDFHFAVTADQALQALE
YFIDFALPCFGDYQDAISDHEEWLFHAILSPYINIGLLAPMDVCEAAVRAWHSGQAPLNA
VEGFVRQILGWREFVRGIYWRLMPDYARENRLGNTRSLPWFYWTGDTKMRCMHKAIDATY
RNAYAHHIQRLMVTGNFALLAGIKPEEICDWYLAVYADAYDWVELPNVLGMVMHADGGYL
GSKPYAASGKYIQRMSDHCQNCHYRVQDATSEDACPFNSLYWHFIDRHRDDFANNHRMGM
MYRNWDKQKPERREALIKRAEWILEHIEEL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctcattttgattcttggtgatcagctcagcacaaccctgtctgcccttgaa
gaagctgataaggacaacgatctgatcgtgatggccgaggttcatgatgaagccagctat
accaatcatcacaagaaaaagctggtgctcgttttcagtgccatgaggcacttcgcccaa
gaattggagcagcacggctggcgagttcaataccagcgctacactctggatacccctgcg
ctatctctggagcagtacataaccactgtggtgcaacagcaccaaccggaacgccttgtc
accaccgagtgcggtgaatggcgtttgcacacccaaatcagtcagtggcacaaaagcctg
ggtattcccgtcgaaattcgtccggacactcggtttatctgcagtcacaaagaatttgcc
gaatgggcagatggcaagaagcaattacgcatggaattcttttaccgggagatgcgcaag
aaaaccggcctattgatgactccggacgggcaaccggaaggcgggcattggaattacgat
gctgacaaccgcaaaaagtggacgggcaagccccctgctcccagaccgtttcgagccgag
ccagacgacatcacacgagaagtcatcaaacaagtggacgagcagttttcggaacacttt
ggcacaaccgacgattttcactttgccgtcaccgctgaccaagccctgcaggcactggaa
tactttatcgacttcgccctgccctgcttcggagactatcaggacgcgatatctgaccat
gaagaatggctgtttcacgccatcttatcgccttatattaatatcggcttgctagcccca
atggatgtctgcgaagccgcagtccgcgcctggcactcgggccaagcaccgctcaatgct
gttgaaggatttgtgcgtcagattcttggctggcgtgagtttgtccgcggaatttactgg
cgattaatgcccgattacgcccgtgaaaaccgtttgggcaatacgcgctcgttgccgtgg
ttttactggaccggcgacaccaaaatgcggtgcatgcacaaagcgatcgatgccacctac
cggaatgcctatgcccaccacattcagcgtttaatggtgaccggcaacttcgcgcttctg
gccgggatcaaacccgaagaaatctgtgattggtatctggccgtgtacgccgatgcctac
gactgggttgagctgcccaatgtactcggcatggtgatgcacgcggatggcggatactta
ggctccaagccctacgcagccagcggcaaatacatccaacggatgtccgaccactgccag
aactgccattaccgcgttcaggatgccacaagcgaagatgcctgcccgtttaacagcctt
tactggcatttcatcgaccgacaccgagacgatttcgccaacaatcatcgcatgggcatg
atgtatcggaactgggacaaacagaaaccggagcggcgcgaggcgctgataaagcgcgct
gagtggattctcgaacacatcgaagaactttaa
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