Marinobacter sp. JH2: MARI_01740
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Entry
MARI_01740 CDS
T06162
Symbol
radD
Name
(GenBank) putative DNA repair helicase RadD
KO
K19789
DNA repair protein RadD
Organism
marj
Marinobacter sp. JH2
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marj03400
]
MARI_01740 (radD)
DNA repair and recombination proteins [BR:
marj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
MARI_01740 (radD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
SLFN-g3_helicase
AAA_22
AAA
DUF7577
AAA_16
DZR
zf-tcix
SNF2-rel_dom
CobA_CobO_BtuR
T1R_D3-like
Zn_Ribbon_1
Zn_ribbon_3
Prot_inhib_II
Motif
Other DBs
NCBI-ProteinID:
QBM16094
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All DBs
Position
170653..172404
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AA seq
583 aa
AA seq
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MNAPFKLRPYQQEAVEATLKHFRKSDESAVIVLPTGAGKSLVIAELARLAKRKILVLTHV
KELVEQNHAKYESYGLTGGIFSAGLKRKENRHQVTFASVQSVSANLDQFKGEYSLVIIDE
CHRVSGEDTSQYQRIIELLKQQNDSLKVLGLTATPYRLAMGWIYRYHHRGFVRSEQDKPF
VHCIYELPLSYMINRGYLTKPELVNAAVAQYDFSALAQDRFGEYAEKDVNELLSKHQRVT
RAIIEQVMELAVERTAVMIFAATVDHAKEITGYLPEHETALITGATELAERDSLIQRFKQ
RQLKYLVNVSVLTTGFDAPHVDFIAILRPTQSVSLYQQIVGRGLRLDEGKQDCLVIDYAG
NSVNLHHPEVGEKKPDPDSEPVQVFCPGCGFANIFWGKTDSEGRVIEHYGRRCQGLLEPL
EQSERPEQCDYRFRFKECPHCGAENDIAARNCHQCKKAIIDPDDQLRDALKLKNAMVIRC
AGMTLSDHGDTLRITYHGEDGEELKESFDFSKSSQRNVFNKRFGRRFANSQAPKEFSKVD
EVLELQALVPAPDFVIARKQKHYWQVQERIFDYQGQYRKANGA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctccttttaagctgcgcccctaccagcaagaagccgtcgaggccaccttgaag
cacttccgaaaatcggatgagtctgcggtgattgtgctgccgaccggtgcgggtaagagc
ctggtgattgcagaattggctcgcttggccaagcgcaagattctggtgctgacgcatgtg
aaagagctggtggagcaaaaccacgctaagtacgagagctatgggttaaccggcgggatc
ttttccgctgggctgaagcgcaaggagaaccggcatcaggtgacctttgcgagtgtgcag
tccgtttcggcgaacctggatcagttcaaaggcgaatattcgttggtgatcatcgatgag
tgccatcgggtgagcggcgaggataccagccagtatcagcgcatcatcgagctgctgaaa
cagcagaacgattccctcaaagtgcttggcttaactgccacaccttatcgtctggcgatg
ggctggatataccggtatcaccatcggggctttgtgcgcagtgagcaggacaagccgttt
gtgcattgcatctacgagctgccgctcagttatatgatcaatcgcgggtatctcaccaag
cccgaattggtcaatgcagcggtggcgcaatacgatttctctgcgctggcgcaggaccgt
tttggcgaatacgccgagaaggacgtcaacgaactgctgagtaaacaccagcgcgtaacc
cgggccattattgaacaggtgatggaactggcggttgagcgcactgcggtgatgatcttt
gcggccacggtggatcatgccaaggaaatcaccgggtatttgccagagcacgaaactgcg
ctgattaccggggcgacagagctggctgagcgggactccttgattcagcggttcaagcaa
cggcagttgaagtatctggtaaatgtgtcagtgctcaccacgggcttcgatgcacctcat
gtagatttcattgccattcttcgacctacccagtcggttagcttgtatcagcagattgtg
ggccgcggtctgcgtttggatgaaggcaagcaggattgtctggtgattgattacgcgggc
aatagcgtcaatttacatcacccggaagtgggcgagaaaaagccggaccccgacagcgaa
ccggtgcaggtgttttgcccaggctgtgggtttgccaatatcttctggggtaaaaccgac
agcgaaggccgcgttattgaacactatggtcgccgttgtcaggggctgctggagcctttg
gagcagagcgagcgccccgagcagtgcgattaccgttttcgattcaaagagtgcccgcat
tgcggtgccgagaatgacatcgcagcccgaaactgccaccagtgtaagaaggccattatt
gacccggacgatcagcttagagatgccctgaaactcaaaaatgcgatggtcatccgttgc
gccggaatgacgttgagcgatcatggcgacacgttgaggatcacctatcatggtgaagat
ggggaagagctcaaggagtcattcgatttcagtaaatcgagccaacgtaatgtatttaat
aaacggttcgggcgacgtttcgcgaacagccaggcaccgaaagagttcagtaaggttgat
gaagtgctcgagctgcaggccttggtgccagcaccggattttgtgattgcgcgcaagcaa
aagcattattggcaggtgcaggagcgaatttttgattatcaggggcaatatagaaaagcg
aatggggcataa
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