Marinobacter sp. JH2: MARI_03680
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Entry
MARI_03680 CDS
T06162
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
marj
Marinobacter sp. JH2
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
marj03009
]
MARI_03680 (rimO)
Enzymes [BR:
marj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MARI_03680 (rimO)
Ribosome biogenesis [BR:
marj03009
]
Prokaryotic type
ribosomal protein modification factors
MARI_03680 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QBM16288
LinkDB
All DBs
Position
374550..375890
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AA seq
446 aa
AA seq
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MTEKTENAAQGGKVGFISLGCPKALVDSERILTQLRLDGYDVVPTYNDADVVVVNTCGFI
DAAKQESLDAIGEALNENGKVIVTGCMGAEADTIREAHPGVLAVSGPHAYEEVVGAVHQY
VPPKKDHDPFVDLVPPQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDVM
DEAQRLVDAGVKELLVISQDTSAYGVDTKYRTGFWQGRPLKTKMQALCEALGELGVWVRL
HYVYPYPHVDDIIPLMAEGKILPYLDIPFQHASPKVLKAMKRPAHDSKTLDRIRKWRDIC
PELTIRSTFIVGFPGETEEDFQYLLDWLDEAQLDRVGAFTYSAVEGAPANELEGAVPEEV
KEERLARFMQKQAEISAARLQAKIGKTIEVLIDEVDEEGAIGRSKADAPEIDGMVYLNDV
SDVEPGQIVEAVVEHADEHDLWASLV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaagacagaaaatgccgcccaaggcggaaaagttggttttatcagccttggc
tgcccgaaggctctggttgattccgagcgcatcctgactcagcttcgtctggatggctac
gatgtggtaccaacttataacgacgctgacgtcgtagttgtgaatacttgcgggtttatt
gatgctgccaagcaggaatccctggatgcgattggtgaggcgctcaatgaaaatggcaag
gtgatcgtaaccggttgtatgggtgctgaggctgatacgattcgtgaagcccatcccggt
gtactggcggtgtctggccctcatgcctacgaggaagtggttggagccgtgcatcagtac
gtgcctcctaaaaaggaccacgatccttttgtcgatctggtcccaccgcagggcgtcaag
ctcacgcctcggcactatgcctacctgaaaatctccgaaggctgcaaccaccgttgtacc
ttctgcatcatcccttcgatgcgcggtgacctcgttagtcgtccaattggcgatgtcatg
gacgaggcgcagcgtctggtggatgccggcgtcaaagagctgctggtgatttcccaggat
acttccgcctacggcgtagataccaaataccgcaccggcttttggcaggggcgtcctctg
aaaaccaaaatgcaggctttgtgtgaagcgttgggtgaattgggtgtttgggtgcgtttg
cactacgtctacccgtaccctcatgtagacgacatcattccgttgatggctgaagggaaa
attttgccgtacctggatattccgttccagcacgccagcccgaaagtgctcaaggccatg
aagcgaccagctcatgacagcaaaacgttggatcgtattcgcaaatggcgcgacatctgt
ccggagttgaccattcgttcgaccttcatcgttggtttcccgggtgaaactgaagaagac
ttccagtacctgctggattggttggacgaagctcagctggatcgggttggcgcgttcacc
tatagcgcggttgaaggcgcgccggccaacgagctcgaaggagccgttccggaagaggtg
aaagaagagcgtcttgcacgcttcatgcagaaacaagccgaaatctcagcggcgaggcta
caggccaagatcggcaagaccatcgaggtgctgattgacgaggtggacgaagagggtgcc
attggtcgatccaaggccgacgctccggaaattgacggcatggtatacctgaacgacgtt
tctgatgttgagccagggcagattgtggaggcggtggttgagcacgccgacgaacacgat
ttgtgggcgtctctggtgtaa
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