Marinobacter sp. JH2: MARI_07010
Help
Entry
MARI_07010 CDS
T06162
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
marj
Marinobacter sp. JH2
Pathway
marj03030
DNA replication
marj03430
Mismatch repair
marj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MARI_07010 (dnaE)
03430 Mismatch repair
MARI_07010 (dnaE)
03440 Homologous recombination
MARI_07010 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marj03032
]
MARI_07010 (dnaE)
03400 DNA repair and recombination proteins [BR:
marj03400
]
MARI_07010 (dnaE)
Enzymes [BR:
marj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MARI_07010 (dnaE)
DNA replication proteins [BR:
marj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MARI_07010 (dnaE)
DNA repair and recombination proteins [BR:
marj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MARI_07010 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QBM16613
LinkDB
All DBs
Position
749952..753434
Genome browser
AA seq
1160 aa
AA seq
DB search
MANTFVHLRVHSEYSMVDGLVRVKPLINRVAELGMPAVGLTEQSNMCSLVRFYQGTMGAG
IKPIVGADLWLENPDEPENPFRLTLLARDNDGYLHLTEIISLGYTEGQKYGKPIVRKEWL
EARAGGLIALSGAKMGDVGKALLAEKPDLARERAQYWKNLYPASYYLELQRTDRAGDEDC
LHLSVELAAEMGLPVVATNDVHFLTADDFEAHEARVCIGESRTLDDPRRDRRFSDRQYLR
SAEEMIELFSDIPEAIENTVEIARRCSVKVRLGEYFLPNYPIPDGMTMDDYFRKVSEEGL
DMRLESILSKDDPDYDQKRAAYDERLKFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYVLLITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIEYTA
QKYGREAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKLIPFEVGMTLNKAIEQEP
QLKEFLEQDEEAQEIWEMALKLEGVCRNAGKHAGGVVIAPTKITDFSPLYCDDEGGSLVT
QFDKGDVEEAGLVKFDFLGLRTLTIIKWALHMINPRREKRGEPELDIATIPLDDKASFEM
LKKAETTAVFQLESRGMKDLIRRLQPDSLEDMIALVALFRPGPLQSGMVDDFIDRKHGRQ
PMSYPHPDYQYEGLKPVLEPTYGVILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPEE
MAKQKALFLDGCEENGIDKALAENIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKAHYP
AEFMAAVLTADMQNTDKVVTLVEECRNMKLDLLVPDVSRSEYTFTVNDDGQVVYGLGAIK
GLGEGPIESVVAAAKEGGPFQDIFDFARRVDLKKVNKRAMEALIRAGAMDKLGATRAQLM
ASIDKAIQQAGQQSRNDAVGMVDMFGEMLGGGDDEEVYADVAGVREWPEKQRLKGEKDTL
GIYLTGHPFDEYEKEVRRFVRSSISELKPNKSPQRVAGLVVAQRTMKTRTGSTMCFITLD
DRSARIEATLFSEAYFENRELLQSDQVIVLEGQVSHDDYSGQMKMRVSSVTDVATARQQF
SRGIRLALHADQLQNGLLDKIDDTLRPFRNDGSPVWIEYSSAEARTRIELGESWRVQPDD
DLLFELKHLVGDQAVELVYD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatactttcgtacacctgcgcgtacattctgaatattccatggtggatggcctg
gttcgggtcaagccgctgatcaatcgggtggctgagttgggtatgccagccgttggactt
accgaacagtccaacatgtgttcgctggttcgtttttaccagggaaccatgggagcaggt
ataaaaccgatcgtgggcgctgacctgtggttggaaaacccggatgagcctgaaaatccg
ttccgccttactttgctcgcgcgtgacaacgacggctacctgcacctaacggaaattatt
tccttgggctataccgaggggcaaaaatacggcaaaccgattgttcgaaaagaatggttg
gaggctcgtgctggcggcttgatcgctttgtcgggcgcaaaaatgggtgacgttggaaag
gcattgctggcggaaaaaccggatctagcccgggagcgtgcgcagtactggaaaaatttg
taccccgctagctattacctggaattgcagcgtaccgaccgggccggtgatgaagattgt
ttgcacttgagtgttgaactggcggctgagatggggttgccagtggtagcgaccaacgat
gtgcacttcctgaccgccgatgattttgaggcgcacgaagctcgagtgtgcattggtgaa
agtcgcaccttggacgatccgagacgggatcgccggttcagtgaccggcagtacctgcga
agcgccgaggaaatgatcgaactgttttcggatattcccgaagcgatcgaaaataccgtc
gagattgctcgtcgctgctcggtaaaagttcgactgggtgaatacttcctgccgaattat
ccgattccagatggtatgaccatggacgattacttccgaaaagtgtcggaagaaggtctg
gatatgcgtttggaatccatcctgagcaaggatgacccggactacgatcaaaagcgtgcc
gcctatgacgaacgcttgaagtttgagctcgacattatcatccagatggggttcccgggt
tacttcctgatcgttatggatttcatcaagtgggccaaaaacaacggtgtgcccgttggg
ccgggtcgtggttccggtgccggctcgctcgttgcttatgtgttgttgatcaccgacctg
gatccgcttgaatacgatttgctgtttgagcgattcctgaacccggagcgggtatccatg
cccgacttcgacgtcgacttctgcatggaaggccgggaccgggtcattgaatacaccgcg
cagaaatacggccgtgaagcggtgtcccagattattaccttcggtaccatggctgcgaag
gcggtggtgcgagacgtggcgcgagttcagggtaagtcctatggcctggcagataagctc
tccaagctgattccgttcgaagtaggcatgactctgaataaggccatcgagcaggagccc
cagcttaaagagtttcttgagcaagacgaagaagctcaggaaatctgggagatggcgctc
aagcttgagggtgtttgccggaacgctggtaagcacgccgggggtgtcgttatcgcgccc
accaaaatcaccgacttttcacccttgtattgcgatgacgagggcggaagcctggtcacc
cagttcgataaaggtgacgttgaagaagccggattggtgaaattcgacttcttaggtctg
cggactctgaccatcatcaaatgggctcttcacatgatcaacccgcgccgggaaaagcgc
ggggagccggaactcgatatagcgacgatccctctggacgataaagcctcgttcgaaatg
ctgaagaaggctgagacaacggccgtattccagcttgaatcacgaggcatgaaagatctg
attcggcggctgcaaccggactcgctggaagacatgatcgcactggtagcactgttccgg
cctggcccgcttcagtctggcatggttgacgactttatcgaccggaagcacggccggcag
ccgatgtcctacccacatccggattatcaatacgaaggcctgaaaccagtattggagccc
acttacggggttatcctgtatcaggaacaggtcatgcagatcgcccaggtcatggcgggt
tataccctgggtggcgccgacatgcttcgccgagcgatgggtaagaaaaaacccgaggaa
atggccaagcagaaagcgttgtttctcgatggttgtgaagaaaacggcatcgacaaagca
ctggctgagaacatcttcgacctggttgagaaatttgccggctatggctttaacaagtct
cactccgcagcctacgccctggtgtcgtaccagacattatggatgaaggcccattaccct
gctgaatttatggcagcggtactgacagcggatatgcagaacaccgacaaggtggtcacg
ctggtcgaagaatgccggaatatgaagctcgacctgctggtgccggacgtgagtcgttct
gagtacacttttactgttaacgatgatggccaggtcgtctacgggctgggtgccatcaaa
ggtttgggtgaaggccctattgaaagcgtggttgcagcagccaaagaagggggcccgttt
caggatatctttgacttcgctcgccgggttgatctgaaaaaggttaacaaacgtgccatg
gaggcgttgattcgcgccggtgcgatggacaagctcggagcgactcgggctcagcttatg
gccagcattgataaggctatacagcaagctggtcaacaatctcgaaacgatgctgttggc
atggtggatatgttcggggaaatgctcggtggcggagatgacgaagaggtgtatgccgac
gtcgctggtgtccgcgaatggcctgaaaagcagcgccttaaaggtgaaaaagacacgctg
ggcatttatcttaccggccaccccttcgatgagtacgaaaaagaggtgcgccgctttgtg
cgttcgtcgatttcggagctaaaacccaacaagtcccctcaacgagtggcgggcttggtg
gtggcgcagcgcacgatgaagactcgcacaggttcaaccatgtgcttcatcaccttagac
gatcgcagtgcccgaattgaagcgaccctgttttcggaagcctattttgaaaaccgggag
ttgttgcagtcggatcaagtgatcgtgttggaagggcaggtcagccacgacgattactcc
gggcagatgaagatgcgtgtgagctcggtcaccgatgtggctaccgcgcgtcagcagttc
agccgagggattcgattagcgttgcatgctgatcagttgcaaaacggtctactggataaa
atagatgacacgctacggccgttccgtaacgacggcagcccggtatggattgagtatagt
agcgcagaagcccgcacccgcattgagctaggagagtcttggcgtgtgcagccggatgac
gatcttctgtttgagctgaagcatttggtgggcgaccaagctgtagaactggtctatgat
taa
DBGET
integrated database retrieval system
