Marinobacter sp. JH2: MARI_07600
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Entry
MARI_07600 CDS
T06162
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
marj
Marinobacter sp. JH2
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
marj03009
]
MARI_07600 (dbpA)
Enzymes [BR:
marj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MARI_07600 (dbpA)
Ribosome biogenesis [BR:
marj03009
]
Prokaryotic type
rRNA helicases
MARI_07600 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
CMS1
AAA_19
AAA_22
Flavi_DEAD
Cas3-like_C_2
SBF_like
Terminase_3
Motif
Other DBs
NCBI-ProteinID:
QBM16669
LinkDB
All DBs
Position
813145..814518
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AA seq
457 aa
AA seq
DB search
MSSFKELGLSSTMLANLEQLGFTQATGIQVKALPPALAGKDVIAMAQTGSGKTAAFGIPL
VEKLQPKRFSVQALVLCPTRELADQVAKALRELARAKENVKVLTLCGGVSIGPQIGSLSH
GAHIIVGTPGRVEDHLRKGTLSLEHLNTLVLDEADRMLDMGFEDVVAGILAQTPSSRQTL
LFSATWPMPIRTLSERFQVDPEDVRIEVNDSTATIEELFYEISPGQEVEAVAALLSRFQP
TASLVFCTTKRGCDDLADALRQKGFAASALHGDLEQRERDSTLVQFANQSCTVLVATDVA
ARGLDIKGLPLVINAEPARDPEVYTHRIGRTGRAGEQGHAVTLCTPKQGHKISRLESACG
MTAEWGDSGQLLSEPVRPVAPPMKTLCLAGGRKEKVRRGDVLGALTGEAGIPGTAVGKID
LFDFQCFVAVDVAWASKALLRLEQGRVKGRKIRVRYV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttttaaagagcttggcctttcttcgaccatgctggctaaccttgagcagctg
ggcttcacgcaggctactggcattcaggtaaaggccttgccaccggctttggcgggcaaa
gatgtgattgccatggctcaaacgggtagcggaaaaacggctgctttcggtattcctctg
gttgaaaagcttcagcccaagcggttttcggttcaggcgttggtgctttgcccaacgcgt
gagctggcggatcaagtagccaaagcactgagggaactggcgcgtgcgaaagaaaacgtg
aaggtgctgactttgtgcggtggtgtatcgatcgggcctcagattggttcgctcagccat
ggcgctcacatcatcgtcggcacgccggggcgggttgaagaccacctgcgtaaaggaacc
ttgtcgctggagcatctgaatacgctggtgctggatgaagcggaccgcatgcttgatatg
gggtttgaggatgttgtggccggtattcttgcgcaaacaccttcctcgcggcagacgttg
ctattctccgcaacatggccgatgcctatacggaccctaagtgagcgttttcaggtggac
ccggaagacgtgcggattgaggtgaacgattcaaccgccacgatagaagagctgttttac
gagatttcgcccgggcaagaagtggaagctgttgcagcattgctctcccgattccagccg
acggcgagtttggttttctgtaccaccaaacggggctgtgacgatcttgcagacgcgctc
aggcagaagggtttcgccgcttcggcattgcatggtgatttggagcagcgggagcgtgac
agcacgctggtgcagtttgcgaaccaaagttgcacggttttagtcgcgaccgatgtggcg
gctcgtggtctggatatcaaaggcttgccactggttattaatgcggagcccgctcgggat
cccgaagtttatacgcatcggattggtcgcacagggcgtgcgggtgagcaggggcatgcg
gtgaccttgtgtacaccgaagcagggtcacaagatctctcgtttggagagcgcgtgcggc
atgacagctgagtggggcgattccggacaactgctttcagagcctgtaaggcctgttgcc
ccacccatgaagactctctgtctggctggagggcgtaaggagaaggttcgccgcggcgat
gtgttaggggctttgaccggcgaagccgggatccccggtactgcggtagggaaaatcgat
ctgtttgattttcagtgttttgttgctgtcgacgtggcttgggctagtaaggcgctttta
cggcttgagcaagggcgggtgaaagggcgaaaaatacgcgtgcgttatgtctaa
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