Marinobacter sp. JH2: MARI_07960
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Entry
MARI_07960 CDS
T06162
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
marj
Marinobacter sp. JH2
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marj03032
]
MARI_07960 (ihfB)
03036 Chromosome and associated proteins [BR:
marj03036
]
MARI_07960 (ihfB)
03400 DNA repair and recombination proteins [BR:
marj03400
]
MARI_07960 (ihfB)
DNA replication proteins [BR:
marj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MARI_07960 (ihfB)
Chromosome and associated proteins [BR:
marj03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
MARI_07960 (ihfB)
DNA repair and recombination proteins [BR:
marj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
MARI_07960 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HTH_40
HU-CCDC81_bac_1
HU-DNA_bdg
DUF5666
Plk4_PB1
Motif
Other DBs
NCBI-ProteinID:
QBM16705
LinkDB
All DBs
Position
854865..855161
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELVELVASKQTQLSVKDVELAVKTIIEHMSQALADGQRIEIRGFGSFSLHHREARV
GRNPKTGEAVQLPAKYVPHFKPGKELREQVNDSLKKGF
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtccgaactggttgaacttgtagcatcaaagcagacacagctctcggttaaa
gatgtcgagttggctgttaaaacgattattgaacatatgtctcaagcgttagcagatggt
cagcgtatcgagatcagagggtttggcagtttttctttacatcaccgcgaagcgcgcgtt
ggccgaaacccgaaaaccggtgaagccgtgcagttaccagcaaagtacgtgccgcatttt
aagcctgggaaagaactacgagaacaggttaatgatagcttgaaaaaaggattctaa
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