Marinobacter sp. JH2: MARI_08020
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Entry
MARI_08020 CDS
T06162
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
marj
Marinobacter sp. JH2
Pathway
marj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MARI_08020 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marj03400
]
MARI_08020 (uvrB)
DNA repair and recombination proteins [BR:
marj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MARI_08020 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MARI_08020 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_22
AAA_30
DUF87
TrwB_AAD_bind
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QBM16710
LinkDB
All DBs
Position
859147..861204
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AA seq
685 aa
AA seq
DB search
MASQSTRTPKEGVFRVDSPYQPAGDQPTAITGLVDGIHSGLAHQTLLGVTGSGKTFTIAN
VIQEVQRPTIVMAHNKTLAAQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEK
DASINEHIEQMRLSATKALLERPDAIIVASVSSIYGLGDPESYMKMMLHLDRGDPVEQRD
ILRRLAELQYTRNDVEFHRANYRVRGDVIDVFPAESEREAIRIELFDDEVEQLSYFDPLT
GEVLRRVPRVTIYPKSHYVTPRQKVLDAVENIKVELDERLKQLRDNHRLVEAQRLEERTR
YDIEMMLELGYCNGIENYSRYLSGRDPGAPPPTLFDYLPPNALLVVDESHVTISQIGAMY
KGDRSRKETLVEYGFRLPSALDNRPMRFEEWERIAPQMIFVSATPGNYEAEHAGQVVEQV
VRPTGLLDPLIEVRPASTQVDDLLSEIHARVEVKERVLVTTLTKRMAEDLTDFLMEHDIR
VRYLHSDIDTVERVEIIRDLRRGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNVNGKAILYGDRITGSMQRALDETERRRAKQQAHNEEHGITPTGLNKK
IADIMEGAPGGGRGRRKAERPGQKAAEEAEDYLVAAGKRSPQELLKEVANLEDEMYQAAA
DLDFEAAARLRDRISELKEAAIRNG
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggctagtcaatcaactcgtactcccaaagagggtgtttttcgtgtcgattctccctat
cagccagccggggaccaacccacggcgattaccgggctcgtagacggtatccactctggt
ttggctcatcagacgcttctgggcgttactggctccggtaaaaccttcaccattgccaac
gtgattcaggaggtgcagcggccaaccatcgtgatggctcataacaaaaccttggcggcc
cagttatacggtgagtttaaggaatttttccccgataacgcggtggagtattttgtttcc
tactacgactattatcagccggaagcctacgttccgtcctctgatacgtttattgaaaaa
gacgcgtctatcaacgaacacatcgaacaaatgcgtttgtcggcgactaaggcattgttg
gagcgcccagacgcaatcatcgtggcctcggtgtcatcgatctatggtttgggtgatccc
gaatcctatatgaaaatgatgctgcatttggaccggggtgatccggttgagcagcgggac
atattgcgtcggttggctgagctacagtacacccgcaacgatgtggaatttcatcgggct
aattatcgggttcgcggcgatgtgattgacgtgttcccggcagaatccgagcgtgaagct
attcgtattgagttgttcgacgatgaagtggagcagttaagttattttgacccactgacc
ggtgaagtcctgcgcagggtgccgcgcgtcaccatataccctaagtctcactacgtgacc
ccgcgccagaaagttctggatgcggttgagaacattaaagtggaactggacgagcggctg
aaacaattgcgcgacaaccatcgtttggtggaagcgcagcgacttgaagagcgcacacgt
tacgacatcgagatgatgttggagttgggctactgcaacggcatcgaaaactattcccgc
tatctgtctggccgagatccgggggcgccgccacctacgttgttcgattatcttcctccc
aatgccttgttggtggtggacgaatcccacgtgacgatttcgcagattggagccatgtac
aagggtgaccgttcgcggaaagaaacgttggttgagtatggcttccgtttgccatccgcg
ctggacaatcgccccatgcgctttgaagagtgggagcggattgcaccacagatgattttt
gtttcggcaacgccgggtaactacgaggcagagcacgcagggcaggtggtggagcaggtg
gtcaggccgaccggcttgctggatccgttaattgaggtccggcctgcgtccacacaggtg
gatgacctgctatccgagatacatgctcgggtcgaggttaaggaacgtgttcttgttacg
acgctaaccaaacgcatggcggaagacttaaccgatttccttatggagcacgacattcgg
gtgcgctatctgcattctgacattgatacggttgagcgggtggaaatcattcgtgacctc
cgccgcggtgagtttgatgtgttggtgggcattaacctgttgcgggaaggtttggatatg
cccgaggtttctttggttgccattctggatgccgataaagaaggtttcttacgcagcgag
cggtcgctgattcagactatcgggcgggctgcgcgtaacgtgaacggtaaagccattctt
tacggcgatcggatcacgggctctatgcagcgggcgttggacgaaacggagcgccgccgg
gcgaaacagcaggcccacaacgaagagcacggcattacacccaccggtctgaacaaaaag
attgctgacattatggagggcgctcccggcggcggtcgcggtcgtcgcaaggccgaacgg
ccagggcagaaagctgcggaggaggcagaagattaccttgttgcagcaggcaagcgatcg
ccccaggagctgcttaaagaggtggccaatctcgaagatgagatgtaccaagccgccgcc
gatctggatttcgaggcggcggcccggttgcgggatcgaatctccgaattaaaggaggct
gcaatcagaaacggctaa
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