Marinobacter sp. JH2: MARI_09970
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Entry
MARI_09970 CDS
T06162
Symbol
cdhR_2
Name
(GenBank) HTH-type transcriptional regulator CdhR
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
marj
Marinobacter sp. JH2
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
marj03000
]
MARI_09970 (cdhR_2)
Transcription factors [BR:
marj03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MARI_09970 (cdhR_2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
QBM16898
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Position
1067529..1068503
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AA seq
324 aa
AA seq
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MIKNYGILLLPEFSNLCFSNLIEPIRAANDLSERPVAKWHLFSVDGQCVSSTSGLTFPVS
KSIADIPGTAPLDVLFLLASYNYESYITADLVKSLRKLKPYAVQMAGLDAGAFALAKAGL
LSGYRATIHWAELEVFHERFPDIKVCADRYVIDRDRITTGGASTSMDLILELIRQHHGEQ
LALAVAEYLIFDIEQPGSKQQREYAPTWLSVRAPRLAKAVRIMEANIEQPIAISDLASKV
GTSQRQLEREFHEMFKTTPARHYIELRVASAQRLLRETSLGITQIAVRCGFSSSAALTRN
YHSVYSCTPSNDRKSHRARISASV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaattacggcatccttttactgccagagttcagtaatctttgtttttccaat
ctaattgagcccattcgcgctgcgaatgatctgtcggagcggcctgttgctaagtggcat
ttattctcggttgatggtcaatgtgtatcaagtaccagtgggctgacgttcccggttagt
aaaagcattgccgacattcccggtacagcgccgctggacgtgctctttttattagccagc
tataattatgaatcgtatatcaccgcggatttggtaaagagtctccggaaacttaagccc
tatgcagtccaaatggcagggctggatgctggcgcttttgcgctcgctaaagcgggcttg
ctgagtggttatcgggccacgattcattgggcagagctagaggtgtttcatgagcgcttc
cccgacatcaaagtttgtgctgatcgttatgtgattgatagagacaggatcacgacaggt
ggggccagtacatctatggatctcatcttggagttgatacgtcagcatcatggcgaacag
ttagcccttgcggtagcggagtacctcattttcgatatcgagcaaccgggcagtaagcaa
cagagagaatatgcgcctacctggctcagcgtccgggctccgcgattggcgaaagccgtg
agaatcatggaggcgaatattgagcagccaattgcgatctcagatttggcttcaaaggta
ggtacttcgcaacgtcagcttgagcgcgagtttcatgaaatgtttaaaacaacaccggct
cgtcattacattgaattgcgggtagcttcagctcagcggctattgagggaaacgagtctc
ggtattactcagatagctgtgcgttgtgggttcagttcttctgctgcactgacacgaaat
taccattctgtgtatagctgtaccccgtcgaacgaccgaaaatctcatcgggcgcgtatt
tctgcttctgtttag
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