Marinobacter sp. JH2: MARI_16500
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Entry
MARI_16500 CDS
T06162
Symbol
ntrC
Name
(GenBank) DNA-binding transcriptional regulator NtrC
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
marj
Marinobacter sp. JH2
Pathway
marj02020
Two-component system
marj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MARI_16500 (ntrC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
MARI_16500 (ntrC)
02025 Biofilm formation - Pseudomonas aeruginosa
MARI_16500 (ntrC)
09142 Cell motility
02040 Flagellar assembly
MARI_16500 (ntrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
marj03000
]
MARI_16500 (ntrC)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
marj02035
]
MARI_16500 (ntrC)
Transcription factors [BR:
marj03000
]
Prokaryotic type
Helix-turn-helix
Other families
MARI_16500 (ntrC)
Bacterial motility proteins [BR:
marj02035
]
Flagellar system
Flagellar assembly proteins
Others
MARI_16500 (ntrC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
AAA_7
nSTAND3
AAA_25
AAA_22
AAA
ATPase
SLFN-g3_helicase
bpMoxR
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
QBM17535
LinkDB
All DBs
Position
complement(1777762..1779210)
Genome browser
AA seq
482 aa
AA seq
DB search
MPQNNKVLVLSNNEARQRDLITILEFVGEEQIVAGDEALALLQSGEAAQIEQASVALVHG
EDHNAKTVIASVCEATPGLPILLVGDLDAEQLPEDHISRLIAHMEWPLNYTKFVDSLYRA
QIYRDQYSRAPERGMQRGVQLFRSLVGTSRRVQQVRQLMEQVADKDVSVLITGESGTGKE
VVARNLHYHSSRRDKPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRVGRFELAEGGT
LFLDEIGDMPLNMQVKILRVLQERTFERVGSNRTQSADVRIIAATHKNLEDMIESGDFRE
DLYYRLNVFPIEMPALRDRVEDLPLLINELISRMEKEKRGSLRMNSAAIMSLCRHDWPGN
VRELANLVERLAIMHPYGVIGVQELPKKFRYVDDYDESRPVEETGMPSAIPGLVGLDSPA
LLPINGIDLKDYLSNLERQLIQQALDEASGVVARAAEKLRIRRTTLVEKVRKYGLRDDAA
DS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaataataaagtgctggtgctcagcaacaacgaagccagacagcgtgatttg
atcacaattctggagtttgtgggcgaagagcagattgttgccggtgacgaggcgttggcg
cttttacaaagtggtgaagcggctcagatagagcaggcatcggttgctcttgttcatggt
gaagatcataacgccaagacggtgattgcttcggtatgtgaggccacgccagggctgcca
atcctattggtgggggatctcgatgcggagcaattacccgaagatcatatatcgcgcttg
atcgcccatatggagtggccgctcaattacaccaaattcgtcgattcgctctatcgcgca
cagatctaccgcgaccagtatagccgtgctccggaacgaggcatgcagcgaggcgttcag
ctgtttcgcagtttggtgggcaccagtcggcgcgtgcaacaggttcgccagctcatggag
caggtggcggataaagatgtcagtgttctgattacgggtgagtctggtaccggcaaagaa
gttgttgcccgcaacctgcattaccattcctcgcgccgggacaagccgtttgtgccggtt
aactgcggcgcaatccccgcagagttattggaaagtgaactttttggccatgaaaagggc
gcctttaccggggcgattacgtcgcgggtggggcgatttgagctcgctgaggggggcacc
ctgtttctggacgagatcggcgatatgccgctcaatatgcaggtcaagatactgcgggtc
ctgcaggaacggacctttgagcgggtcggcagtaaccggactcagtcggctgatgttcgc
atcatcgccgcgactcacaaaaatcttgaggatatgatcgaatccggcgacttccgggaa
gacctctactatcgcctcaatgtattccccatcgaaatgcccgcattaagagatcgcgtt
gaagatcttccgttgttgatcaacgagttgatttccagaatggaaaaagaaaagcgtggc
tccctgcgaatgaactcggcagccatcatgagcctttgccggcacgattggccgggtaac
gtcagggagttggccaacttggttgaacggctggcgattatgcacccttacggcgtgatc
ggagtgcaagagctgccgaagaaattccgttatgtggacgattacgatgaaagccgcccg
gtggaagaaaccggcatgccatctgccattccggggcttgtagggctcgactccccggca
ctgcttccgattaatggcatcgatctcaaagactatctgtcgaatttggaacgccagctt
attcagcaagcgttggatgaagcttcgggtgtggtcgcaagagccgctgagaaattgcgg
attcggcgtacaacgttggttgaaaaagtccgcaagtacggcctgcgggacgacgcagcg
gattcctga
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