Marinobacter sp. JH2: MARI_21830
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Entry
MARI_21830 CDS
T06162
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
marj
Marinobacter sp. JH2
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
marj03009
]
MARI_21830 (rluD)
Enzymes [BR:
marj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
MARI_21830 (rluD)
Ribosome biogenesis [BR:
marj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MARI_21830 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QBM18054
LinkDB
All DBs
Position
complement(2383041..2384018)
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AA seq
325 aa
AA seq
DB search
MSSENRITGQFKIPPGLSDKRLDQAAAELMPEHSRSRLQSWIKSGVLTVNGKTCKPRDKV
MLNDVLELDAEPEVKVTWEAEPITLDIVYEDEHLLVINKPAGLVVHPAAGHADGTLVNAL
LNYAPEVENLPRAGIVHRLDKDTSGIMVVARSLIAHTSLVNQLQERTMGREYEAVVVGSL
TGGATVDAPIGRHPQDRKRMAVVSSGKPAVTHYRLIERFAAHTHVRCKLESGRTHQIRVH
MTHVRHPLVGDPVYGGRLRLPKGTTEELRVELAAFNRQALHARKLTLEHPETGETLSWEV
ELPEDMVQLIAALRKHALELEENDF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgaaaacagaatcaccggccagttcaaaatccctccgggtttgagcgataaa
cgactcgatcaggcggcggccgagttgatgcccgagcattcccgctcccgtttgcagtcg
tggattaaaagcggcgtactgacggttaatggcaaaacctgcaagcccagagacaaggtg
atgctcaacgatgtgcttgagctggatgccgagccggaagtcaaagtgacgtgggaggca
gagcccatcacgctcgatatcgtttatgaagacgagcatttgctggtcatcaataagccg
gctggcttggtagtgcacccggcagcgggtcatgccgacggcactttggtgaacgcgctt
ttgaactacgcgcccgaggtcgaaaacctgcctcgtgccggtattgtgcaccgtctggat
aaagacacgtcgggtattatggtcgtggccagaagtttgattgcccacacctcgctggta
aaccagctccaggaacgcaccatgggccgggaatacgaagcagtagtggtgggttcgttg
accggtggcgccacggtggacgcacccattggccgccacccgcaagatcgcaagcgtatg
gcggtggtgtcatccggcaagcctgcggtaacccactaccgcttgattgagcgttttgca
gcccatactcatgtgcgctgtaagctggaaagtggccgaacgcaccagatccgtgtgcac
atgactcatgtaaggcacccgctggtgggtgatccggtgtatggcggccgtctgcgtctg
cccaagggcacaaccgaggagcttcgggttgagctggccgcgttcaatcgtcaagctttg
cacgctcgcaagttgacgctggagcacccggaaaccggtgaaaccttgagttgggaagtc
gagttgccggaagatatggttcagctcatagcggcattgcgtaagcacgccctagaactg
gaagaaaatgatttctga
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