Marinobacter sp. JH2: MARI_22190
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Entry
MARI_22190 CDS
T06162
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
marj
Marinobacter sp. JH2
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marj03400
]
MARI_22190 (radA)
DNA repair and recombination proteins [BR:
marj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MARI_22190 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
RecA
SLFN-g3_helicase
AAA_22
GvpD_P-loop
AAA_16
AAA
ABC_tran
Rad51
DUF7125
AAA_30
divDNAB
NTPase_1
AAA_24
AAA_33
Viral_helicase1
PAXNEB
DEAD
Zeta_toxin
AAA_14
nSTAND3
DUF7767
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QBM18090
LinkDB
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Position
2421494..2422873
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AA seq
459 aa
AA seq
DB search
MAKTKTAYVCTECGADYSKWQGQCTACQAWNTVSEVRGISGNNAKGARGIRFEGYAGSLS
EVKSLDEVSLAEQARISTGMQEFDRVLGGGLIEGSAVLMGGHPGAGKSTLLLQAVCQLAA
QHPALYVTGEESLQQVAMRAKRLGLPTKDLKMLSETSVERVMQVAEAEKPRILVVDSIQV
MHVADIESAPGSVSQVRESAAYLTRFAKQTGTILFLVGHVTKDGSLAGPKVLEHMIDCSI
LLEGSSDSRYRTLRGIKNRFGAVNELGVFAMLEQGLKEVKNPSAIFLNRGEEAAPGSVVM
VVWEGTRPMLVEIQALVDMAQGSYPRRVAVGLDQNRLAMLLAVLHRHGGMHVADQDVFVN
VVGGVKVAETSADLALLAAVVSSFRNRALPQDLVIFGEVGLSGEIRPVPSGQERIYEASK
HGFTRALVPKANAPRKPIEGMKVIPVTKLSDALSALEEF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaccaaaaccgcgtatgtctgcaccgagtgcggcgctgattactccaaatgg
cagggccaatgcaccgcctgccaagcctggaataccgtcagcgaagtacgcggcatttcc
ggcaacaacgccaaaggcgctcgaggcattcgcttcgagggctacgcgggcagtttgtcg
gaggtcaaaagccttgatgaggtcagtctggccgagcaagcccgtatcagcaccggtatg
caggaatttgaccgtgtgctcggtggcggcctgatcgaaggctcagcggtgttaatgggc
ggccatcccggcgctggtaaaagtactctgttgcttcaagccgtgtgtcagctcgcagcc
cagcaccccgctctgtacgtgaccggcgaggaatcgctgcaacaagtcgccatgcgcgcc
aaacgcctcggcttgcccaccaaagacctgaaaatgctgtcggaaaccagcgtcgagcgg
gtcatgcaagtggccgaagcggaaaaaccgcgcattctggtggtggacagtattcaggtg
atgcacgttgccgacatcgaatcggcaccgggctctgtttcgcaagtacgagaaagcgcc
gcttacctgacccgtttcgctaagcagaccggcaccattctgtttctggtaggtcacgtc
accaaagacggcagcctggccggcccgaaagtacttgaacacatgatcgactgctcgatc
ctgttggaaggctcaagcgacagccgttaccgcactctgcggggcatcaagaaccgattc
ggcgcggtgaacgaattgggcgttttcgccatgctggaacagggcttgaaagaggtgaaa
aaccccagcgccatcttcctgaatcgcggcgaagaggcggctccgggcagtgtggtgatg
gtcgtatgggaaggcacccgccctatgctggtggagatccaggcattggtggatatggcc
caaggcagctacccaagacgagttgcggttggcttggaccaaaatcgactggcgatgctg
ctggcagttctgcaccgccatggtggcatgcatgtggcggatcaggatgtgttcgtgaac
gtggttggcggggtgaaagtggccgaaaccagtgcggatttggcattgctggctgccgtt
gtctcgtctttccgaaaccgcgctctgccacaggatttggtgattttcggggaagttggc
ctttcaggtgaaattcgcccggtacccagtgggcaggagcggatttacgaggcatccaag
catggcttcacccgggcactggtcccgaaagccaacgctccgcgtaagcctatcgagggg
atgaaggttattccggtgaccaaactatcggatgcactttcggcattggaggagttttaa
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