Marinobacter sp. JH2: MARI_22910
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Entry
MARI_22910 CDS
T06162
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
marj
Marinobacter sp. JH2
Pathway
marj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MARI_22910 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marj03021
]
MARI_22910 (rpoA)
03400 DNA repair and recombination proteins [BR:
marj03400
]
MARI_22910 (rpoA)
Enzymes [BR:
marj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MARI_22910 (rpoA)
Transcription machinery [BR:
marj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MARI_22910 (rpoA)
DNA repair and recombination proteins [BR:
marj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MARI_22910 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QBM18162
LinkDB
All DBs
Position
complement(2512487..2513491)
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVHELLTPRTIDVKESGALRAKVTLEPLERGFGHTLGSALRRILLSSMPGCAVTEAQ
IDGVLHEYSAIEGVQEDVIEILLNLKGVAVKMNGRDDTELTLSKKGPGVVTAGDITLDHD
VEIANPEHVICHLSENGELNMRLRVSRGRGYEPADQRGLDEDETRAIGRLQLDATFSPVR
RVSYAVESARVEQRTDLDKLVIDLETNGTIDPEEAIRRAATILQQQLAVFVDFDHEKEPE
RVEEEEEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLRGDDRVLGG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtacatgagttattgacacctcgtacgatcgacgtgaaagagtccggc
gctttgcgtgccaaggtcactctggagccgctagaacgcggctttggtcataccttgggc
agtgcgcttcgccgcattcttctgtcttcgatgccaggctgcgccgtgactgaagcacag
atcgacggtgtcctgcacgagtacagtgccatcgagggtgtccaggaggacgtcattgag
attcttttgaacctcaagggcgttgccgtaaagatgaacggacgtgatgacactgagctg
acactcagcaaaaaaggtccgggcgttgtaactgctggtgatatcacgttggatcacgac
gttgaaatcgctaacccggaacacgttatctgtcacctgagcgagaacggcgaactgaac
atgcgcttgcgcgtgtctcggggtcgcggctacgagccagctgatcagcgtggactggac
gaggacgaaactcgtgccattgggcgtttgcagcttgatgctacgttcagcccggttcgc
cgagtgtcttatgcggtagaaagtgcacgggttgagcagcgtacagatctcgacaagctt
gttattgatctggagactaacggtacgatcgatccggaagaagcaattcgccgggccgcg
actatcctccagcaacaattggctgtgttcgtcgatttcgatcatgaaaaagagccggag
cgcgtagaagaagaggaagaaatcgatcctattctgttgcgtccggttgatgatcttgag
ttgactgtacgttcggctaactgcttgaaggcagaaaatatttactatatcggcgatcta
atccagcgcacagaagtggagctgctgaagacgcctaaccttggcaaaaagtcgctgacc
gagatcaaggacgttctagcgtcccgtggtctgtcactgggaatgcgtcttgataactgg
ccgccggcaagccttcgtggtgatgaccgggttctgggcggttaa
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