Marinobacter sp. JH2: MARI_23650
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Entry
MARI_23650 CDS
T06162
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
marj
Marinobacter sp. JH2
Pathway
marj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARI_23650 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marj03019
]
MARI_23650 (pcnB)
Enzymes [BR:
marj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MARI_23650 (pcnB)
Messenger RNA biogenesis [BR:
marj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MARI_23650 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
QBM18226
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All DBs
Position
2576806..2578176
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AA seq
456 aa
AA seq
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MPKRLVDKLRSFMPGTGKKKAKHYQRKEIPRDQHNVSRSVISEPAKKVLNRLNKSGFEAY
LVGGGVRDIVLGGRPKDFDIATNATPEEVHDLFRNSRLIGRRFRIVHVVFGREIIEVTTF
RGNAEASNEDHSDHEHKTSEHGLLLRDNVYGNLEDDALRRDFTINALYYCIRDFSIIDFA
NGMQDLENQQIRLIGDPATRYREDPVRMLRAIRFAAKLGFEIEPETEAPIRELAPLLGHI
PPARLFDEVLKLFSAGYGEATYELLKDYGLLEMLFPETVRALNNGESDELIHQALRNTDA
RIAQGKSVTPYFLFAAMLWPALQAEWRIRQDNGDPVQPALHGAIGKVIGRQVQATSIPKR
FSGPMKEIWELQTRLPRRQGKRAFATLSHPRFRAAYDFLLVRESAGELEPGLGAWWTDFQ
RTDERGQEKMLSQVGAAAGPRKRGRKRSPNKKPSQS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagacttgtagataagttgcgttctttcatgcccggcaccgggaaaaagaaa
gccaaacattaccagcgtaaagaaatcccgagagaccaacacaatgtgtctcgctcggtg
atcagcgaacccgctaagaaagtgctaaaccgcctgaacaagtctggcttcgaagcctac
ttggtgggtgggggtgtgcgggacatcgttctgggtggccgacccaaagatttcgacatt
gccactaatgcaacaccggaagaagtacacgatctgttccgtaattctcggctgatcggt
cgccggttccgcatcgtgcacgtggtctttggtcgcgaaatcatcgaggtaaccaccttt
cgcggcaacgcagaagcctcgaacgaagaccactctgatcacgaacacaaaaccagcgaa
cacggtctcctgctgcgcgacaacgtttacggcaatctggaggacgatgctctgcgccgc
gatttcaccatcaatgctctttattattgcattcgcgacttcagcattatcgacttcgca
aacggcatgcaggatctcgagaaccagcaaatacgcctgattggtgacccggcaacccga
taccgtgaagatccggtgcgcatgctgcgcgctattcgtttcgcggcgaagcttggcttc
gagatcgaacccgaaaccgaagcgcctattcgtgagctggcccctcttttaggccacata
ccaccggcccgtctgttcgacgaagtgcttaaactgttttcggcgggctacggtgaagcc
acctacgaactgctgaaggactatggcctactggagatgctgttcccggaaaccgtgcgc
gccctcaataacggtgaatcggacgaactcatccaccaagccttacgcaacaccgatgct
cgcatcgcccaaggcaaatcggtcacaccttacttcttgtttgccgccatgctgtggccc
gcgctgcaagcagaatggcgcattagacaggataacggcgatccggtgcagccggctttg
cacggcgcaatcggtaaagtaattggccgccaggtacaagctacgtcgattcccaagcgc
ttctccggaccaatgaaagaaatctgggaactgcagactcgacttccccgccgccagggc
aaacgagcatttgccacacttagccacccccgcttccgcgccgcgtatgacttcttgctt
gtgcgcgaatctgccggcgagctggagcccggccttggtgcttggtggacggacttccaa
agaacggacgaacgcgggcaggaaaaaatgctgtctcaggtgggcgccgcagccgggccc
cgcaagcgtggtcgtaaacgcagccccaacaaaaagccctctcagtcgtga
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