Marinobacter sp. JH2: MARI_24010
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Entry
MARI_24010 CDS
T06162
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
marj
Marinobacter sp. JH2
Pathway
marj03030
DNA replication
marj03410
Base excision repair
marj03420
Nucleotide excision repair
marj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MARI_24010 (polA)
03410 Base excision repair
MARI_24010 (polA)
03420 Nucleotide excision repair
MARI_24010 (polA)
03440 Homologous recombination
MARI_24010 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marj03032
]
MARI_24010 (polA)
03400 DNA repair and recombination proteins [BR:
marj03400
]
MARI_24010 (polA)
Enzymes [BR:
marj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MARI_24010 (polA)
DNA replication proteins [BR:
marj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MARI_24010 (polA)
DNA repair and recombination proteins [BR:
marj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MARI_24010 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MARI_24010 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DUF4854
Motif
Other DBs
NCBI-ProteinID:
QBM18261
LinkDB
All DBs
Position
2614630..2617356
Genome browser
AA seq
908 aa
AA seq
DB search
MTEKKTPPVVLVDGSSYLFRAYHALPPLTTSKNHPTGAIKGVVSMLRRLDQDFPESKVVV
VFDAKGKTFRHEMYEEYKANRPPMPEDLAIQIEPIHEIVKAMGLPLLIVPGVEADDVIGT
LAHEATHKGIDVVVSTGDKDMAQLVSDHVTLINTMTETAMDRDGVIEKFGVTPEQIIDYL
ALVGDKVDNIPGVNKCGPKTAVKWLQSYNDLANLIDHASEIKGKIGEYLREAIDTLPLSR
DLATIRLDVELEFGLEDLKDREQNHDALLELFKEYEFRGWISQLESRDSEQPDTVAAPDE
TRQAIERVYTVITEQSEFDAWLKRLETADQFAFDTETTSLRYMDAEIVGVSFAIEPGEAA
YVPVGHDYMGAPDQLDRDEVLAQLKPLLENPKQAKIGQNLKYDKNVLANHGIHLDGISDD
TMVESYVLNSVASRHDMDSLAKAYLDEDTVSFESIAGKGAKQLTFNQIDLEKAGPYAAED
ADITLRLHHALSPKLKETGKLASVYRDIDLPLVPVLSRMEQRGTLISASTLRQHSQELAE
RMAELEKEAHEVAGEAFNLGSPKQLQAILYDKLGLRVIKKTPKGAPSTAEPVLQELAHDH
ELPRLIVEHRSLSKLKSTYTDTLPELIHHRTGRVHTSYHQAVTATGRLSSSEPNLQNIPI
RTQEGRRIRQAFIAPEGYKLLAADYSQIELRIMAHLSGDKGLLKAFEHGEDIHKATAAEV
FGVSLIEVSSDQRRSAKAINFGLIYGMSAFGLARQLGVERKVAQEYIDRYFERYPGVLRY
MDNIRKQAHEDGYVETLYGRRLYLPEINARNKQLQQAAERTAINAPMQGTAADIIKRAMI
DVDQWLYENHADDAVMTMQVHDELIIEVREEAVDKVRDGLVQRMSAAAKLDVPLLVEAGI
GDNWDQAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaaaaagactccgcccgtggttctggtagacggttcgtcctatttgttccgt
gcctaccatgcgctcccgccactaaccaccagcaagaaccaccccaccggtgccatcaaa
ggcgtggtcagcatgctacgccgactggatcaggactttccggaatccaaggttgtggtg
gtatttgatgccaaaggcaaaaccttccgtcacgagatgtacgaagagtacaaagccaat
cgtccacccatgcccgaagacctggccatccagattgaacccattcacgaaatcgttaag
gccatggggcttccacttttgatcgtgcccggtgtcgaggccgacgacgtcatcggcaca
ttggcccatgaggccactcacaaaggcattgatgtggtggtgtccaccggcgataaagac
atggcccaactggtgagcgaccacgttaccctgatcaacaccatgaccgaaacggccatg
gaccgcgacggcgtgatcgagaaatttggcgtaacgccggagcaaatcatcgattacctg
gcactggttggcgataaagtagacaacattccgggcgttaacaaatgcggcccgaaaacc
gcggtcaaatggctgcagtcttataacgatctggcaaacctgatcgaccacgccagcgag
atcaaaggcaagatcggcgaatatctgcgggaagccatcgacaccctgcccttgagccgt
gatttggccaccatccgactggacgtggaactggaatttggtctggaagatttaaaagac
cgcgaacagaaccacgatgcactgctggaactgttcaaggaatacgaattcagggggtgg
atttcccaactggagagccgtgactccgaacaaccagacacagtcgccgcccctgacgag
accaggcaggccattgaaagggtttacacggttatcaccgagcaaagcgagttcgatgca
tggctcaaacgcttggaaaccgcggatcagtttgccttcgataccgaaaccaccagtttg
cggtatatggacgccgaaatagtcggcgtctcgttcgccattgaacccggcgaagcggct
tacgtgcccgttggccacgactacatgggcgcgcccgaccaactggacagggacgaagta
ctggcccagcttaaaccgcttttggagaacccaaagcaagcgaaaatcggccagaacctg
aagtacgacaaaaatgtactggctaaccacggcattcatctcgacggcatcagcgacgac
actatggtggagtcgtacgtgcttaactccgtcgcctctcgccacgacatggacagtctc
gccaaagcctatttggacgaagatacagttagctttgaatccatcgcgggcaaaggtgcc
aagcagctgaccttcaatcagatcgatttggagaaagccggcccttacgctgccgaagac
gcagacatcactctacgcctgcaccacgccctaagccccaagctcaaagaaacaggcaag
ctcgcatccgtgtatcgggatatcgacctgcctttggtgccggtactgtcccgcatggaa
caacgaggcacgctgatcagcgccagtacgctgcgacagcatagccaagagctagccgaa
cgcatggcagagcttgagaaagaagcccacgaagttgccggtgaggcgttcaatctgggt
tcccctaaacagctgcaggctattctatacgataaactgggactgcgggtgatcaagaaa
accccgaaaggtgcaccctcgaccgcagagcccgtgctacaagagctcgctcacgaccac
gaactaccccggctgatcgtggaacatcgtagccttagcaagcttaagtctacttatacc
gataccttgccagagcttatccatcaccgaactggccgagtgcatacctcgtaccatcag
gccgtgacggctacagggcgactttcatcttctgagccgaacttgcagaacattcctatt
cgaacccaggaaggccgccggattcgtcaggcattcatcgcgccagaaggctacaaactg
ctggcagcggactattcccagattgaactgcgcatcatggcgcacttgtctggtgacaaa
ggcctactgaaagccttcgagcacggcgaagatatccataaggcgacagccgcagaagta
ttcggggtaagcctgatcgaagtctcctccgaccagcgccgcagcgctaaagccattaat
ttcggattgatctacggcatgtccgcttttgggttagcccgacagctgggggttgagcgg
aaagtcgcacaggaatacatcgaccgctacttcgagcgttacccgggcgtgctgcgctac
atggacaatatccgcaaacaggcccacgaagacggctatgttgaaacgctgtatggacgc
cgtctgtacctgccggagatcaatgcacggaacaaacagctgcaacaggctgccgagcgc
actgccatcaacgcccccatgcaaggcacggccgccgacatcatcaagcgcgcgatgatt
gatgtggaccaatggctgtatgaaaaccacgctgacgatgctgtgatgaccatgcaggta
cacgatgaactgatcatcgaagttcgcgaagaagcagtggataaagttcgggacggtttg
gtccagcgcatgtccgcggccgccaaactcgacgtaccgctgcttgtggaagcgggtatt
ggtgataactgggaccaagcccactaa
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